Query= MSMg01no059_l12.b1 MSMg01no059_l12.b1 CHROMAT_FILE:
MSMg01no059_l12.b1 PHD_FILE: MSMg01no059_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:17 2005
(446 letters)
>mm_chr9_68176154_68177002
Length = 849
Score = 812 bits (420), Expect = 0.0
Identities = 442/450 (98%), Gaps = 5/450 (1%)
Strand = Plus / Minus
Query: 1 gagtccttgtcctgtgtgtgtcccctaaagctgctcgggagagt--ggagaggaggcagg 58
|||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||
Sbjct: 576 gagtccttgtcctgtgtgtgtcccctaaagctgctcaggaaagtgaggag-ggaggcagg 518
Query: 59 aagggagctttatttcaaaggcagcaagaacagagctgtaatgcttgggggaagagga-c 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 517 aagggagctttatttcaaaggcagcaagaacagagctgtaatgcttgggggaagaggatc 458
Query: 118 acaggggtctgtctcttataacaaagcctggctttcaacactccccttggaacccatg-t 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 457 acaggggtctgtctcttataacaaagcctggctttcaacactccccttggaacccatgtt 398
Query: 177 ttttcagctttctcccgtctatcagatattggcttttattattatcagtggcctttggca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttttcagctttctcccgtctatcagatattggcttttattattatcagtggcctttggca 338
Query: 237 attattctcgattctagaagccagagagtaaacagcaggagtggggtgttgtatgtacct 296
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 337 attattctcgattctagaagccagagagtaaacagcaggagtggggggttgtatgtacct 278
Query: 297 gcagggacatgtggaacaccccacaactccaaactactggagtccctgttggcataggtt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcagggacatgtggaacaccccacaactccaaactactggagtccctgttggcataggtt 218
Query: 357 atgtgcataggttggcgatgtgtgtctgcatgtttatgtacatgtgtttgactgtttatg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atgtgcataggttggcgatgtgtgtctgcatgtttatgtacatgtgtttgactgtttatg 158
Query: 417 tatgtacaggtacatgtatatgcttttgca 446
||||||||||||||||||||||||||||||
Sbjct: 157 tatgtacaggtacatgtatatgcttttgca 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 849
Length adjustment: 10
Effective length of query: 436
Effective length of database: 839
Effective search space: 365804
Effective search space used: 365804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_l12.g1 MSMg01no059_l12.g1 CHROMAT_FILE:
MSMg01no059_l12.g1 PHD_FILE: MSMg01no059_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:17 2005
(448 letters)
>mm_chr9_68097952_68098794
Length = 843
Score = 828 bits (428), Expect = 0.0
Identities = 441/448 (98%), Gaps = 5/448 (1%)
Strand = Plus / Plus
Query: 1 attaggtgtgctctggtgtccaggagaaagaagagcggggcttcacagtgaccattcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaggtgtgctctggtgtccaggagaaagaagagcggggcttcacagtgaccattcctt 260
Query: 61 ttggctgggtcaaggtcttagttcccgaaggtggatcttgtccttggacaaagagggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggctgggtcaaggtcttagttcccgaaggtggatcttgtccttggacaaagagggagg 320
Query: 121 gtgggccagccccaacccagccacctgacacattcccgacccttttacaaatctttcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggccagccccaacccagccacctgacacattcccgacccttttacaaatctttcctt 380
Query: 181 gtagaaagataaggttacgaacacgaataactactgtctttttttttttttttcttttcc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gtagaaagataaggttacgaacacgaataactactgtctttttttttt-----cttttcc 435
Query: 241 ttttgaacatcaccttgtgtgtttaacaaaagatcaagattccttaaacgtttcacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttttgaacatcaccttgtgtgtttaacaaaagatcaagattccttaaacgtttcacattt 495
Query: 301 ttgacattttagttcattaaatgtgtggtcatttcacaaggtttaaaaggtaaatgtcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttgacattttagttcattaaatgtgtggtcatttcacaaggtttaaaaggtaaatgtcgc 555
Query: 361 tttgactttctctgcttccaaagatggggaaggggaagaaagaccacgctgacatggcct 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttgactttctctgctttcaaagatggggaaggggaagaaagaccacgctgacatggcct 615
Query: 421 ctttgagtttgtcttgctcttttgactc 448
|||||||||||||||| |||||||||||
Sbjct: 616 ctttgagtttgtcttgttcttttgactc 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 843
Length adjustment: 10
Effective length of query: 438
Effective length of database: 833
Effective search space: 364854
Effective search space used: 364854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
