TTTGAGCTTTTTTAAATTTTTCTAATTATGCCAGCACAATAATATGGGAN
TAATTTAAAAATTTGGCGGCCGCTAAATAGAANTNAATATATTTCGAAAG
AAGGGGNGGGGAAAATNNTATGGGTTATGCCCTGAAAAAACATTTTTAAA
CGGGGTTATTTTGATTTTGGTTGGAGTCTATCTTCTTGGAGTTCTTTAAA
AATAATGGGAATTAGTCCCCTTATTCAATTTAAGGAATTCAAAAAAACCT
TTTCCAAATTCTGGAGGGTTGGCCTGGTTTGTTTTTGTTGAAAGGGGTCT
TTTTGGCTTTAAGAAAAATTGGGGGAAATTTTAAAAAAATTCCCTTGTGG
GAAAATTTTTATACGTTTTTTAGAACTAGCCCCGTGGGGGGGGTTTTTTT
TTTAAGAAAAAAAAAACCCGGGGGGTTGTTTTAATAATTGAAGAAAGATT
TTTTCCACCATGTTTTTTATTTATGAAAAAAAGAAAACAAATGGTTAGTT
TGGGGAGAAGTGTAAGGGGAAAGAAATTTCCTATTGGGGAACTCTACTAA
ATAAAAGGGTGGGGGGGGTCACCGCCCACAAGGAGAAAGAAAAAGAAAAA
AGGGTGAGATAAAATTTATTTTCTCCGCTTATTTTTTTTTGTTAAAATTA
AAAAAAATAAAAGTGATATAAAAAATATAATTTAATCCCAAGCAAACAAT
ATACTTTATTCGGGTAAAAGAAACAGACCGGATTATTTTT

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCCCCAGCCAGACTGGGATCCTGCA
GATCTCACATGTTCTGGATTCTGCTTCATCCTTCTATGCTGTTGTGCAGG
GGCATCTGGATACCATGAGAGGGAGGAAGCAGAAAAATTGGAATCACATC
TAGATCTCAAAATGAATAACACATTTTAAAATTGTTTATTTATTAGTGGG
GTGTTATATTTTGTATATGTGTCATATTTCTACTTTTATAATGGGGGTCT
TAAATCAGTTCAGGTTTAGCAGAAAGTGCTTTTATAAGCTGAGCTATCTC
TCTGGCTCCTAGACAAGTGTCATTTAGAAGCAAATGAGTCTTTCAATATT
TTAACTACATCAGGATCAGCAAGAAAAGAGAATGGGACTAGATCAGTCAA
TTAATCCAACCACACAATACCCACAGAACTTTCTCTAATAATAATCACTA
GTAATGCTTATTCCTAGGAAATTATGAACATTGATTCCATCAAATGTAAT
ATTCAATCGTGTTTGTACTCAATATGTGTCATATAATTACTTAGATAACA
ACAAATTTATTCTACTTTAATTTGAGTAATCAAAGGAACTTGGTATACTT
TGGGTTAGACATGTCTTTTGGGAAAGATAGAGATTTCTTACATCAGAATT
AAGATTTGTTATTTCCACTGTTTGAAC

Query= MSMg01no060_j01.g1 MSMg01no060_j01.g1 CHROMAT_FILE:
MSMg01no060_j01.g1 PHD_FILE: MSMg01no060_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:19 2005
         (556 letters)



>mm_chr9_5836787_5837743
          Length = 957

 Score = 1031 bits (533), Expect = 0.0
 Identities = 551/557 (98%), Gaps = 1/557 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atccccagccagactgggatcctgcagatctcacatgttctggattctgcttcatccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 atccccagccagactgggatcctgcagatctcacatgttctggattctgcttcatacttc 260

                                                                       
Query: 61  tatgctgttgtgcaggggcatctggataccatgagagggaggaagcagaaaaattggaat 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 tatgctgttgtgcaggggcatctggataccatgagagggaggaagcagaagaattggaat 320

                                                                       
Query: 121 cacatctagatctcaaaatgaataacacattttaaaattgtttatttattagtggggtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacatctagatctcaaaatgaataacacattttaaaattgtttatttattagtggggtgt 380

                                                                       
Query: 181 ta-tattttgtatatgtgtcatatttctacttttataatgggggtcttaaatcagttcag 239
           || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tactattttgtatatgtgtcatatttctacttttataacgggggtcttaaatcagttcag 440

                                                                       
Query: 240 gtttagcagaaagtgcttttataagctgagctatctctctggctcctagacaagtgtcat 299
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 gtttagcagaaagtgcttttataagctgagccatctctctggctcctagacaagtgtcat 500

                                                                       
Query: 300 ttagaagcaaatgagtctttcaatattttaactacatcaggatcagcaagaaaagagaat 359
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ttagaagcaaatgagtctttcaatattttaactacatcaggatcagctagaaaagagaat 560

                                                                       
Query: 360 gggactagatcagtcaattaatccaaccacacaatacccacagaactttctctaataata 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggactagatcagtcaattaatccaaccacacaatacccacagaactttctctaataata 620

                                                                       
Query: 420 atcactagtaatgcttattcctaggaaattatgaacattgattccatcaaatgtaatatt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcactagtaatgcttattcctaggaaattatgaacattgattccatcaaatgtaatatt 680

                                                                       
Query: 480 caatcgtgtttgtactcaatatgtgtcatataattacttagataacaacaaatttattct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatcgtgtttgtactcaatatgtgtcatataattacttagataacaacaaatttattct 740

                            
Query: 540 actttaatttgagtaat 556
           |||||||||||||||||
Sbjct: 741 actttaatttgagtaat 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 957
Length adjustment: 10
Effective length of query: 546
Effective length of database: 947
Effective search space:   517062
Effective search space used:   517062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)