Query= MSMg01no061_a11.b1 MSMg01no061_a11.b1 CHROMAT_FILE:
MSMg01no061_a11.b1 PHD_FILE: MSMg01no061_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:54 2005
(631 letters)
>mm_chr9_64669351_64670381
Length = 1031
Score = 1156 bits (598), Expect = 0.0
Identities = 626/642 (97%), Gaps = 11/642 (1%)
Strand = Plus / Minus
Query: 1 tgaggcaggaggagtatttagcttggtctatacaggatctatatttagtttggtcagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgaggcaggaggagtatttagcttggtctatacaggatctatatttagtttggtcagagg 616
Query: 61 tacctagcaagatcttgactcttaaaaaaatgggaggtggtcaagaaatcctaaaatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tacctagcaagatcttgactcttaaaaaaatgggaggtggtcaagaaatcctaaaatagc 556
Query: 121 ggttaatcagaaaagggaaagtctcattctt-----------taaaaaaaaaaaaaaaga 169
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 555 ggttaatcagaaaagggaaagtctcattcttaaaaaaaaaaaaaaaaaaaaaaaaaaaga 496
Query: 170 aatctatgaaattagaaacctcaattactccttaggctaaaagaatgaaaagtattcatc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatctatgaaattagaaacctcaattactccttaggctaaaagaatgaaaagtattcatc 436
Query: 230 aatgagagcaggttcaaacaacatctcagggatccaacttcagtataattatcaccaaca 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aatgagagcaggttcaaacaacatctcagggatccaacttcagtataattatcaccaaca 376
Query: 290 aagcaacataaatactatgcaaagctggggtgtagctcaataataacacagttgtctaga 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagcaacataaatactatgcaaagctggggtgtagctcaataataacacagttgtctaga 316
Query: 350 accccaggtacccaggttcaattcccaacactacagtttaaaaaattaaataaaatacta 409
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagtcaggtacccaggttcaattcccaacactacagtttaaaaaattaaataaaatacta 256
Query: 410 ttacaaagttctaatatccagaaaaaaattgaaagatgaagggtaggaatatcttagcat 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttacaaagttctaatatccagaaaaaaattgaaagatgaagggtaggaatatcttagcat 196
Query: 470 ttgttagaacaataacaacagagagtttttaattgtttagacagtgtctcactatattgg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttgttagaacaataacaacagagagtttttaattgtttagacagtgtctcactatattgg 136
Query: 530 ccaggttggtccagacctcaccatcttcaagtctggccttcactgtgctgatatgtgcca 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccaggttggtccagacctcaccatcttcaagtctggccttcactgtgctgatatgtgcca 76
Query: 590 ccataccaagttaaactaatttttaaaggaaaatagaattca 631
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 75 ccataccaagttaaattaatttttaaaggaaaatagaattca 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_a11.g1 MSMg01no061_a11.g1 CHROMAT_FILE:
MSMg01no061_a11.g1 PHD_FILE: MSMg01no061_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:54 2005
(507 letters)
>mm_chr9_64550123_64551028
Length = 906
Score = 942 bits (487), Expect = 0.0
Identities = 502/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 1 acttctcttcaccttccatctggggatccctgagctgcactgtcatccccccagcctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttctcttcaccttccatctggggatccctgagctgcactgtcatccccccagcctgtg 260
Query: 61 ctcccttgccacctcagctccatgcctctccaagtaattttggtttctcagacatttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcccttgccacctcagctccatgcctctccaagtaattttggtttctcagacatttaga 320
Query: 121 agccactaacatcctgaaaactccttttgtggctggccagtattctctggacttcagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccactaacatcctgaaaactccttttgtggctggccagtattctctggacttcagatc 380
Query: 181 ccctgtcccatccctcctcatatcctctctctcattgaagagaagaatgcaaacttaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctgtcccatccctcctcatatcctctctctcattgaagagaagaatgcaaacttaacc 440
Query: 241 ctaaggacagaaccagcaggcatcctattgatagcattagctcagaggtgagcaacagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaggacagaaccagcaggcatcctattgatagcattagctcagaggtgagcaacagat 500
Query: 301 acttaatgcctgggtttccacatacatttgaataaattggggcttaccacaatatagcaa 360
|||||||||||||||||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 501 acttaatgcctgggtttccacatacatttgaataaattggggcttaaaa-aagatagcaa 559
Query: 361 gcctcaataggttcagaatatccatagagcaactttgggaagtcatttcctctctagtct 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcctcaataggttcagaacatccatagagcaactttgggaagtcatttcctctctagtct 619
Query: 421 tgtgcttcctcaaaaactaaagatgttcatttcagaaacccattctgactgtgataatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtgcttcctcaaaaactaaagatgttcatttcagaaacccattctgactgtgataatat 679
Query: 481 gcatgactacgtatggtccagaggagg 507
|||||||||||||||||||||||||||
Sbjct: 680 gcatgactacgtatggtccagaggagg 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 906
Length adjustment: 10
Effective length of query: 497
Effective length of database: 896
Effective search space: 445312
Effective search space used: 445312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
