Query= MSMg01no062_i10.b1 MSMg01no062_i10.b1 CHROMAT_FILE:
MSMg01no062_i10.b1 PHD_FILE: MSMg01no062_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:13 2005
(379 letters)
>mm_chr9_120194994_120195772
Length = 779
Score = 687 bits (355), Expect = 0.0
Identities = 373/379 (98%)
Strand = Plus / Plus
Query: 1 gatccagatcagaaacttttatctccagcccccagattaggatcactgcctgagccttcc 60
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 201 gatccagatcagaaacttttatctccagcctccagattaggatcactggttgagccttcc 260
Query: 61 aattctagattgcagttcattccagatatcgtcaagttgacaaccaggaatagccactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattctagattgcagttcattccagatatcgtcaagttgacaaccaggaatagccactac 320
Query: 121 aggtactatcatgtctgtcgactcgaaggtaaccccccctgggaacgaatgctgaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtactatcatgtctgtcgactcgaaggtaaccccccctgggaacgaatgctgaacttg 380
Query: 181 ggatcgtcaccccgtggccctcattctaaaaccatctgccatacgtgctaactttgaaca 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatcgtcaccccgtggccgtcattctaaaaccatctgccatacgtgctaactttgaaca 440
Query: 241 tgcaagcaaacacttagggtggggagctaaaaagaagcttgtcatgccggctggtaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcaagcaaacacttagggtggggagctaaaaagaagcttgtcatgccggctggtaattg 500
Query: 301 accacaaaatcaagatgctcaattttttttttactattttatttatttattgtgtgtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accacaaaatcaagatgctcaattttttttttactattttatttatttattgtgtgtgtg 560
Query: 361 tgtgtgtgtgtgtgtgtgt 379
||||||| ||| |||||||
Sbjct: 561 tgtgtgtatgtatgtgtgt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_i10.g1 MSMg01no062_i10.g1 CHROMAT_FILE:
MSMg01no062_i10.g1 PHD_FILE: MSMg01no062_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:13 2005
(779 letters)
>mm_chr9_120267013_120268189
Length = 1177
Score = 770 bits (398), Expect = 0.0
Identities = 445/466 (95%), Gaps = 12/466 (2%)
Strand = Plus / Minus
Query: 1 aagggaggagtaaaacaccacagatatccttt-----gaaaatactgggcctttggagaa 55
|||||||||||||||||||||||||| | |||||||||||| ||||||| |
Sbjct: 459 aagggaggagtaaaacaccacagata-----tgagaggaaaatactggg-ttttggagca 406
Query: 56 caacacaacaaagcagagtgggcctgggttgttagcaggagttccacgggcaaaggaaca 115
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 405 caacacaacaaagcagagtgggcctgggttgttagcaggagttccac-ggcaaaggaaca 347
Query: 116 ggaggaatgttcaagctgtgattcagcttgggatagccaggctgcagacagccagatagt 175
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggaggaatgttcaagctgtgatccagcttgggatagccaggctgcagacagccagatagt 287
Query: 176 caacaagggactatgggcaatgagacagcatcatgggccctgatgcaatctctaacaacc 235
|||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||
Sbjct: 286 caacaagggactatgggcaatgagacagcatcgtgggccttgatgcaatccctaacaacc 227
Query: 236 ctcgtgtctgggaagctgtgcccagatacttcgataagaacaccccaatgaaaagcaact 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctcgtgtctgggaagctgtgcccagatacttcgataagaacaccccaatgaaaagcaact 167
Query: 296 tagaggaccaaaggcccattgagctcacacttctgggtaactgtccatcattgctgggaa 355
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 166 tagaggaccaagggcccattgagctcacacttctgggtaactgtccatcattgcggggaa 107
Query: 356 gtcatggcagcagggacttgaagcagatcacatacatccacaattaagagcagagagaat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gtcatggcagcagggacttgaagcagatcacatacatccacaattaagagcagagagaat 47
Query: 416 ggatgcatgcatgcttagtgctcagccagcttaatcaagagcagag 461
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ggatgtatgcatgcttagtgctcagccagcttaatcaagagcagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 779
Length of database: 1177
Length adjustment: 10
Effective length of query: 769
Effective length of database: 1167
Effective search space: 897423
Effective search space used: 897423
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
