Query= MSMg01no063_f24.b1 MSMg01no063_f24.b1 CHROMAT_FILE:
MSMg01no063_f24.b1 PHD_FILE: MSMg01no063_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:42 2005
(294 letters)
>mm_chr9_95152755_95153448
Length = 694
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Plus
Query: 1 ctaaaggctgctggtggaagactcacttccaggccgcctttagaggtgagggtctcaagc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaaggctgctggtggaagactcgcttccaggccgcctttagaggtgagggtctcaagc 260
Query: 61 ccatgcccagagtgacacacctatttcaacaaggccacacctcctaatagtgccactccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatgcccagagtgacacacctatttcaacaaggccacacctcctaatagtgccactccc 320
Query: 121 tggaccgagcatacacaaatcatcacactaagtatttctttccttccctcaaaggcctgt 180
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaccgaacatatacaaatcatcacactaagtatttctttccttccctcaaaggcctgt 380
Query: 181 ttttgctctttctaatgtgaacaagtgaaccacttatgttagtccaaagggatgtacgga 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ttttgctctttctaatgtgaacaagtgaaccacttacgttagtccaaagggatgtacgga 440
Query: 241 cgagggcttcttaaattttaatatgcatttggatacactaaggatcttattaa 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgagggcttcttaaattttaatatgcatttggatacactaaggatcttattaa 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_f24.g1 MSMg01no063_f24.g1 CHROMAT_FILE:
MSMg01no063_f24.g1 PHD_FILE: MSMg01no063_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:42 2005
(220 letters)
>mm_chr9_95299392_95300011
Length = 620
Score = 333 bits (172), Expect = 6e-96
Identities = 201/220 (91%), Gaps = 16/220 (7%)
Strand = Plus / Minus
Query: 1 tcgtttattattgaaggtccttgatcttttgaagcttttatagatatcaacactgtccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tcgtttattattgaaggtccttgatcttttgaagcttttatagatatcaacactgtccca 257
Query: 61 agatgtacacataccttcttgttccctagtcattgccacactgtgcacggatctgctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agatgtacacataccttcttgttccctagtcattgccacactgtgcacggatctgctata 197
Query: 121 tatatatatatatatatatatatatatatattgctgctgttgcaggttggaatcacttgc 180
||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 196 tatatatatat-t---------------tattgttgctgttgcaggttggaatcacttgc 153
Query: 181 tggaacgcaggcttcctctcccaggctcaacccatcagaa 220
||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 152 tggaaggcaggtttcctctcccaggctcaacccatcagaa 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
