Query= MSMg01no064_k09.b1 MSMg01no064_k09.b1 CHROMAT_FILE:
MSMg01no064_k09.b1 PHD_FILE: MSMg01no064_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:44 2005
(665 letters)
>mm_chr9_13948147_13949215
Length = 1069
Score = 1247 bits (645), Expect = 0.0
Identities = 662/669 (98%), Gaps = 4/669 (0%)
Strand = Plus / Minus
Query: 1 atttgggcagcacctggctctacatctaggatatgaacaaacctctccagcatttagagt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 atttgggcagcacatggctctacatctaggatatgaacaaacctctccagcatttagagt 810
Query: 61 ttagtggaaacaatggacagaaagaaaagcctgcagagagctgtaaaagagcaagtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ttagtggaaacaatggacagaaagaaaagcctgcagagagctgtaaaagagcaagtgtgg 750
Query: 121 tgctgttatgaagagaaggggatgtcacagacaggagacttaag--a--catggcagagt 176
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 749 tgctgttatgaagagaaggggatgtcacagacaggagacttaaggcatgcatggcagagt 690
Query: 177 gaagaatgttttggaaagaagcaaagacatgtcaagatgataaggtgaaatactcagaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gaagaatgttttggaaagaagcaaagacatgtcaagatgataaggtgaaatactcagaaa 630
Query: 237 acttagcaatgaagaaacaaatggatcaggattcgtgtgccctagtatcacaggctaact 296
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 629 acttagcaatgaagaaacaaatggatcaggtttcgtgtgccctagtatcacaggctaact 570
Query: 297 gtccctgcagagcagcccagcttgagggactctcctctgacacaaaatattctttgtggt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gtccctgcagagcagcccagcttgagggactctcctctgacacaaaatattctttgtggt 510
Query: 357 aagttgtgccttgggggctgtaacttcctcatcagagtctttggagatgccatggccaca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagttgtgccttgggggctgtaacttcctcatcagagtctttggagatgccatggccaca 450
Query: 417 gtctatcctcttctcatttgcttttgctcctgtctgttgcatcagaggttctctgaacta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtctatcctcttctcatttgcttttgctcctgtctgttgcatcagaggttctctgaacta 390
Query: 477 gcagtaaactgcagttaaattactcgacaatcttggattaatgtatgacccttttcagac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcagtaaactgcagttaaattactcgacaatcttggattaatgtatgacccttttcagac 330
Query: 537 ttcagggtgagctctgcctttattaactggcctgccaatggaggaggtagccagccaggg 596
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcagggtgagccctgcctttattaactggcctgccaatggaggaggtagccagccaggg 270
Query: 597 gaacagcaggacttgtgtggctatgctgaagaaagaaagcattatcatgcgagggaggat 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaacagcaggacttgtgtggctatgctgaagaaagaaagcattatcatgcgagggaggat 210
Query: 657 gaagccaga 665
|||||||||
Sbjct: 209 gaagccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1069
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1059
Effective search space: 693645
Effective search space used: 693645
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_k09.g1 MSMg01no064_k09.g1 CHROMAT_FILE:
MSMg01no064_k09.g1 PHD_FILE: MSMg01no064_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:44 2005
(312 letters)
>mm_chr9_13802729_13803440
Length = 712
Score = 538 bits (278), Expect = e-157
Identities = 302/310 (97%)
Strand = Plus / Plus
Query: 3 agtcccccacacctgatgctaaagaactctctgtacagatgaccatgacatacacgttag 62
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 203 agtcccccacacctgatgctaaagtactctctgtacagatgatcatgacatacacgttag 262
Query: 63 gtttcacagtctttcgaaggcttcatcactgctagttgtggctatatttaaaacgtgtgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 263 gtttcacagtctttcgaaggcttcatcactgctagttgtggctatatttaaaaagtgtgg 322
Query: 123 ggtggcttttcaatcaatcttaaacatcaaaaacagttgaattgaggagttatgatttgt 182
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 323 ggtggcttttcaatcaatcttaaacatcagaaacagttgaattgaggagttatgatttgt 382
Query: 183 aactgtaaatttcacagctaacactcagtttgatatagtctttcctaatcttcaaagttg 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 383 aactgtaaatttcacagctaacactcagtttgatatagtctttcctaatcttcagagttg 442
Query: 243 attgttttaagttccctgtcccttgtattaatccaatccccgcatagctacttctactaa 302
||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 443 attgttttaagttccctgtcccttgtagtaatccaatccccacatagctacatctactaa 502
Query: 303 aaggagactc 312
||||||||||
Sbjct: 503 aaggagactc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
