TACCATTTCCGAGAGATCCGCGGAATTCCTTGTTCTACGATTCCAATGCA
CCACCATATCTATCTAAACTCCAAGTTACTCTTAATGCAAATAGCATGAA
CTTTGATTTGAGATTCAGTTTTGAATAGAGACTCCCTAGTTTTCATTGAT
ATATGAAAACTAAACAAACTGGGTATTTAATTCACTGTGTACTTATTAGG
TATCCATATTGAATGCACATACCTGCCCTGCACTATGGATTTCCATTCCA
TTATCCCTGTCCATGATTACATATAAACTCCTTGAGAATAAAGAACAATA
TCTTACTTTGCATTGCCGGCTCTCCATTAGCCACGATTCTTTAGTTAGGG
GAAGGTTGAGATTTAACTGTTCATATAACTAAACAGCCAAAATGACCTTC
CTGCTCTTTCTTTCAACTGGTGATTAAGCTCTGACTAATGGCAGGCAGAT
GGAAATTATGGCTGAAATGTGTATTGTGATTTATTCACAAAGATTCATTC
CAAGTAATTTAGGTAAAAAATTATAATAAAGCATTCAAACAAATAATATA
ACTATTTATAAGTGAGATGCTCATTGAAGTGGGGCTTCCATAAACCAAGA
GCTGTGATCATTCCAAAAGGAAAAGGAAATCCTTCTGGTTGTGTTCATTG
AAAGCCTGA

AATAAANNNNGGGGGCNNNNNNTCNNNNANNNNNNNNNNNNNNNNNNNNN
NNNNNCATNCATNNNANCCTGNCNCCCCTGTTTCAAAATTTANTNACCTA
TANANGTTCCCCNAAATCTCACCTNNAACCTATTTTTCTNNCTCTTCTNN
NCTTGGCTTNNTTTGATNNAAAAANAAATTCACCTCNCNNCNTTCTTCNA
NCCTAANNAANAAANNNTNNCNCCNTCCTCCCCCATTAAATACAGGGGGG
GGGGGGGGGCNTNCCTACNNCNCCNNANCANCCCNNAACCTNNTNCCCNC
CNNTAAANNCACCCTTCCTCTCCNNACTATAGGGGGGGGGGGGGGGGGGG
TCCNTNCCCNNNNNNNCCCCCCCNCCCCCCACCNCCCCNCTACCCTTNNN
NCCNNNAAAATTCTAAAAACCCCCCCCCCTTAAGGGGGGGGGGGGGGGGG
GTNNNNNNNNNNNNNNNNACNNCNCCNCCCCCNNNNNNNNNNNNNCNNTC
CTTCNNNTTTTCNCTTTTTAGTTGGGGGTGCCTNNNNNCNNNNNNNNNNC
NNCTACTACCTCTNNCNTCNCNCCCCCCNNNNCCTCCCCTCACCCCTCCC
NNTNNNTACTTTAAAACCCNNCCCCCGCCCCTTATAGGGGGGGGGGGGGG
GGGGGAANNAGGGGAANNNTTCCNNGGGGNNNA

Query= MSMg01no065_f07.b1 MSMg01no065_f07.b1 CHROMAT_FILE:
MSMg01no065_f07.b1 PHD_FILE: MSMg01no065_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:48 2005
         (401 letters)



>mm_chr9_90950982_90951782
          Length = 801

 Score =  750 bits (388), Expect = 0.0
 Identities = 397/400 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   aatgcaccaccatatctatctaaactccaagttactcttaatgcaaatagcatgaacttt 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aatgcaccaccatatctatctaaactccaagttactcttaatgcaaatagcatgaacttt 261

                                                                       
Query: 62  gatttgagattcagttttgaatagagactccctagttttcattgatatatgaaaactaaa 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gatttgagattcagttttgaatagagactccctagttttcattgatatatgaaaactaaa 321

                                                                       
Query: 122 caaactgggtatttaattcactgtgtacttattaggtatccatattgaatgcacatacct 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caaactgggtatttaattcactgtgtacttattaggtatccatattgaatgcacatacct 381

                                                                       
Query: 182 gccctgcactatggatttccattccattatccctgtccatgattacatataaactccttg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gccctgcactatggatttccattccattatccctgtccatgattacatataaactccttg 441

                                                                       
Query: 242 agaataaagaacaatatcttactttgcattgccggctctccattagccacgattctttag 301
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agaataaagaacaatatcttattttgcattgccggctctccattagccacgattctttag 501

                                                                       
Query: 302 ttaggggaaggttgagatttaactgttcatataactaaacagccaaaatgaccttcctgc 361
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttaggggaaagttgagatttaactgttcatataactaaacagccaaaatgaccttcctgc 561

                                                   
Query: 362 tctttctttcaactggtgattaagctctgactaatggcag 401
           |||||||| |||||||||||||||||||||||||||||||
Sbjct: 562 tctttcttacaactggtgattaagctctgactaatggcag 601


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space:   310464
Effective search space used:   310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)