Query= MSMg01no065_h11.b1 MSMg01no065_h11.b1 CHROMAT_FILE:
MSMg01no065_h11.b1 PHD_FILE: MSMg01no065_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:59 2005
(365 letters)
>mm_chr9_91405598_91406362
Length = 765
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 2/363 (0%)
Strand = Plus / Plus
Query: 3 tgccttaaaag-aacaaagactttctgcctcttggagtgagcgaactgcccccaggtagc 61
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgccttaaaagaaacaaagactttctgcctcttggagtgagcgaactgcccccaggtagc 262
Query: 62 tacattttccaaggcaggctggtttaaagtagaaaatgccaagagacatcttgctgtccc 121
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 263 tacattttccaaggcaggctggttgaaagtagaaaatgccaagagacatcttgctgtccc 322
Query: 122 cagaaacagctgagatcatctgaccatctcaggttacaaagaattccaagtcctagtgtt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cagaaacagctgagatcatctgaccatctcaggttacaaagaattccaagtcctagtgtt 382
Query: 182 tattgtttttccctaaatggaacttcaggagtgcttcctcacatatgatttcaagaggga 241
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 383 tattgtttttccctaaatggaacttcaggagtgcttcctcacatatgagttcaagaggga 442
Query: 242 gaagaggaagagaaaaagagatctgaaacttctttaggtacatgatactaaataaatagt 301
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 gaagaggaagagaaaaagagatctgaagcttctttaggtacatgatactaaataaatagt 502
Query: 302 tggtccagtttgatcctccctgcttgaagcatttacatcatcaaccattacattttttca 361
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 503 tggtccagtttgatcctccctgtttgaagcatttacatcatcaaccattacattttt-ca 561
Query: 362 gta 364
|||
Sbjct: 562 gta 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_h11.g1 MSMg01no065_h11.g1 CHROMAT_FILE:
MSMg01no065_h11.g1 PHD_FILE: MSMg01no065_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:59 2005
(172 letters)
>mm_chr9_91571977_91572548
Length = 572
Score = 310 bits (160), Expect = 4e-89
Identities = 169/172 (98%)
Strand = Plus / Minus
Query: 1 aagatcatgtgcatctccagctatgcccactttagcatcacctccataaagtggataaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aagatcatgtgcatctccagctatgcccactttagcatcacctccataaagtggataaga 313
Query: 61 ctttacatttgccattcaaatgcacatttgtgatacaaaataaaattatatcgatggaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 312 ctttacatttgccattcaaatgcacatttgtgatacaaaataaaattatatccatggaat 253
Query: 121 tatgctctagggagcattgtattagtgacttctctcggttctgtgatctggc 172
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 tatgctctagggagcattgtattagtgacttctctcatttctgtgatctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
