Query= MSMg01no065_p16.b1 MSMg01no065_p16.b1 CHROMAT_FILE:
MSMg01no065_p16.b1 PHD_FILE: MSMg01no065_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:38 2005
(520 letters)
>mm_chr9_28756770_28757688
Length = 919
Score = 990 bits (512), Expect = 0.0
Identities = 518/520 (99%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 1 aaactactcagttaaaatgttctaatagcatcaccaccacctcctttgtagaactagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaactactcagttaaaatgttctaatagcatcaccaccacctcctttgtagaactagttc 660
Query: 61 tcatcacagggagtaagcatacctatctagactgtgtctaccaatttggggacatggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tcatcacagggagtaagcatacctatctagactgtgtctaccaatttggggacatggcat 600
Query: 121 tctggaccttttgaggaagactgccagaattccgaggaactcctgctaattggcaccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tctggaccttttgaggaagactgccagaattccgaggaactcctgctaattggcaccttt 540
Query: 181 tactgtaacttgggcatcacgcaacctttgcaactactagccttgaaatccaagtatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tactgtaacttgggcatcacgcaacctttgcaactactagccttgaaatccaagtatcat 480
Query: 241 ttttgcattttcttttccacattttacaagatacattaaactctagcctgtttttttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttttgcattttcttttccacattttacaagatacattaaactctagcctgtttttttttc 420
Query: 301 ctgatattaaaatggttatgctgttctcatttagctactaagctagtggactagcctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctgatattaaaatggttatgctgttctcatttagctactaagctagtggactagcctttc 360
Query: 361 atttctcagcctacgcaagtatgtacttctgaacttactctagcacaaagttacaatgtt 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 359 atttctcagcctacgcaagtatgtacttctgaacttactctagcacaaag-tacaatgtt 301
Query: 421 gggccctatttgtcttttctcttcaaggtcttaattctttttttatttaggcctttaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gggccctatttgtcttttctcttcaaggtcttaattctttttttatttaggcctttaaac 241
Query: 481 tttggaggtcaagccatttaatttatagttgtttcggtaa 520
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 240 tttggaggtcaagccatttaatttatagttgttttggtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space: 463590
Effective search space used: 463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_p16.g1 MSMg01no065_p16.g1 CHROMAT_FILE:
MSMg01no065_p16.g1 PHD_FILE: MSMg01no065_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:38 2005
(238 letters)
>mm_chr9_28564567_28565204
Length = 638
Score = 391 bits (202), Expect = e-113
Identities = 229/238 (96%)
Strand = Plus / Plus
Query: 1 ttcggcttttcttgttatgctagctgtacataattacagaggccagtgtgcatgcggggt 60
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 201 ttcggcttttcttgttatactagctgtacataattacagaggccaatgtgcatgtggggt 260
Query: 61 gtgtgtactggaagacaccagtggctcaccctgtggacttttttaggactgataaaatgg 120
|||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 261 gtgtgtgctggaagccaccagtggctcaccctctggaattttttaggactgataaaatgg 320
Query: 121 ctgccatgtgggtgtgtagatcttaggtatgggagaggaagccccatttgctctgtgcat 180
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ctgccatgtgggtatgtagatcttaggcatgggagaggaagccccatttgctctgtgcat 380
Query: 181 ttgtaggagataggcttgatagtattttggattgcagcaatgcacgttcaaatacagc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtaggagataggcttgatagtattttggattgcagcaatgcacgttcaaatacagc 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
