Query= MSMg01no069_d19.b1 MSMg01no069_d19.b1 CHROMAT_FILE:
MSMg01no069_d19.b1 PHD_FILE: MSMg01no069_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:56 2005
(285 letters)
>mm_chr9_23021706_23022390
Length = 685
Score = 484 bits (250), Expect = e-141
Identities = 278/292 (95%), Gaps = 8/292 (2%)
Strand = Plus / Plus
Query: 1 agatactccctgccacagattctgcagcctccattctgtgcctgattctgtgatttcatt 60
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 193 agatactccctgccacagactctgcagcctccattctgtgcctgattctatgatttcatt 252
Query: 61 cttacatgagccttatggcctttgcatgcacccacatggcattgacatttacacacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cttacatgagccttatggcctttgcatgcacccacatggcattgacatttacacacacac 312
Query: 121 acacacacacacacacacacacacacacacaca--------atctctggcttttgtatgt 172
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 313 acacacacacacacacacacacacacacacacacacacaaaatctctggcttttgtatgt 372
Query: 173 ccccacatatgacagtatatgttcttggcaacttgttttttttttcccacttagaataat 232
|||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 373 ccccacatataacagtatatgtccttgggaagttgttttttttttcccacttagaataat 432
Query: 233 gtcttgtgttttatctacataatagcataaaacaaacatttgtttctgttta 284
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtcttgtgttttatctacataatagcataaaacaaacatttgtttctgttta 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_d19.g1 MSMg01no069_d19.g1 CHROMAT_FILE:
MSMg01no069_d19.g1 PHD_FILE: MSMg01no069_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:56 2005
(241 letters)
>mm_chr9_23192710_23193350
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Minus
Query: 1 ctttgtcatgtgtgaaagaagaaaactggtaaatctcatgtatttagaggcatacctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttgtcatgtgtgaaagaagaaaactggtaaatctcatgtatttagaggcatacctcca 382
Query: 61 aaaacatgagtcaccataccgtcaaaagagaacacagggttagttatgcttaaagtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacatgagtcaccataccgtcaaaagagaacacagggttagttatgcttaaagtttgg 322
Query: 121 gttctaagttctagcagattacagtatgagctgacttctctctgtttatcttctctggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttctaagttctagcagattacagtatgagctgacttctctctgtttatcttctctggcc 262
Query: 181 ttcagatcctttcattgatggagctgatggtagcttccacttggtagaaacatcctgaga 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ttcagatcctttcattgatggagctgatggtagcttccacttggcagaaacatcctgaga 202
Query: 241 a 241
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
