Query= MSMg01no071_n12.b1 MSMg01no071_n12.b1 CHROMAT_FILE:
MSMg01no071_n12.b1 PHD_FILE: MSMg01no071_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:22 2005
(520 letters)
>mm_chr9_36389311_36390230
Length = 920
Score = 951 bits (492), Expect = 0.0
Identities = 510/516 (98%)
Strand = Plus / Minus
Query: 5 gaattctccattcccatactcatacattctccctttccatctgtctctgatatgaaaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaattctccattcccatactcatacattctccctttccatctgtctctgatatgaaaatt 661
Query: 65 atagacctcattccccctccctttttttttactttccttgtccttcttcaagttacctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atagacctcattccccctccctttttttttactttccttgtccttcttcaagttacctgt 601
Query: 125 ccttttcatcctcatttcacctccttaatactgcaaccttttcagtttcttatgctcaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ccttttcatcctcatttcacctccttaatactgcaaccttttcagtttcttatgctcaat 541
Query: 185 ttttcatggctctaagtgtatattgaaagttgggcaagcaaagttctcaatagtatgata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 540 ttttcatggctctaagtgtatattgaaagttgggcaagcaaagttctcaataggatgata 481
Query: 245 acaatgagaaagtgcccatccatgtgtgattggcttaggcagcctgcatcaggtctctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acaatgagaaagtgcccatccatgtgtgattggcttaggcagcctgcatcaggtctctga 421
Query: 305 tgttcatcattatggtctgtccattgccagtatttggggtggcgagttccctaaagcttg 364
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 420 tgttcatcattatggtctgtccattgccaggatttggggtggcgagttccctaaagcttg 361
Query: 365 ctgcctcgaagacatctctttccagaggcctgctggggtcagcaaaacatacaacacaat 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgccttgaagacatctctttccagaggcctgctggggtcagcaaaacatacaacacaat 301
Query: 425 ccccactagtgattatttcttcttcatacccacattaaccatgcttgaagccgaccttga 484
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 300 ccccactagtgattatttcttcttcagacccacaggaaccatgcttgaagccgaccttga 241
Query: 485 gtaaacctcttacactttgttttgcctttcagctct 520
||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtaaacctcttacactttgttttgcctttcagctct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_n12.g1 MSMg01no071_n12.g1 CHROMAT_FILE:
MSMg01no071_n12.g1 PHD_FILE: MSMg01no071_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:23 2005
(327 letters)
>mm_chr9_36250762_36251489
Length = 728
Score = 578 bits (299), Expect = e-169
Identities = 320/327 (97%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 1 tctgtgaa-ataaccagggatgagaaggtctttaaagatccactaagcacattagggaat 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtgaacataaccagggatgagaaggtctttaaagatccactaagcacattagggaat 260
Query: 60 gggatgcctgtctttgcccaaattgggactgagggtgatggacaatgtctgcaggacagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatgcctgtctttgcccaaattgggactgagggtgatggacaatgtctgcaggacagt 320
Query: 120 caaacagggtctgaggaactacctgtggagagaatgggggtgagaaacacaaagacaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaacagggtctgaggaactacctgtggagagaatgggggtgagaaacacaaagacaaac 380
Query: 180 agaaagtctgatgatcaagctgtcaattttttttttattccctgtgggcaggttttatgc 239
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 agaaagtctgatgatcaagctgtcaa-tttttttttattccctgtgggcaggttttatgc 439
Query: 240 cctctgaagcagggtatggggagggggatgatacagaatcgctttggatctgggggaact 299
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccacagaagcagggtatggggagggggatgatacagaatcgctttggatctgggggaact 499
Query: 300 tacctgtccccatacacaggatactgg 326
||||||||||| || |||||||||||
Sbjct: 500 cacctgtccccaaacgcaggatactgg 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
