Query= MSMg01no072_h10.b1 MSMg01no072_h10.b1 CHROMAT_FILE:
MSMg01no072_h10.b1 PHD_FILE: MSMg01no072_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:13 2005
(176 letters)
>mm_chr9_65945347_65945923
Length = 577
Score = 327 bits (169), Expect = 3e-94
Identities = 175/177 (98%), Gaps = 1/177 (0%)
Strand = Plus / Plus
Query: 1 ataatgagatcctttttc-aaagcaaggggtgtacggagtgtttgctctgtggttatgag 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataatgagatcctttttcaaaagcaaggggtgtacggagtgtttgctctgtggttatgag 260
Query: 60 tattagctgctctttcagagcacataggtcgggtttctagcacccacacggggttcacag 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattagctgctctttcagagcacataggtcgggtttctagcacccacacggggttcacaa 320
Query: 120 ctcttagttctaaggaatctggcagcctcttctgtcctcctcaggcccccttcacac 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttagttctaaggaatctggcagcctcttctgtcctcctcaggcccccttcacac 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 577
Length adjustment: 8
Effective length of query: 168
Effective length of database: 569
Effective search space: 95592
Effective search space used: 95592
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no072_h10.g1 MSMg01no072_h10.g1 CHROMAT_FILE:
MSMg01no072_h10.g1 PHD_FILE: MSMg01no072_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:13 2005
(245 letters)
>mm_chr9_66099672_66100316
Length = 645
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%)
Strand = Plus / Minus
Query: 1 ccttaatagttcaatatggaaactagaattgtaaagaaacccaagatttaagaagaaacg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 308 ccttaatagttcaatatggaaactagaattctaaagaaacccaagatttaagaagaaacg 249
Query: 61 ggtgacaaaatctctagctctggagttacagagaaatggttgtttactctgcaccagact 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 248 ggtgacaaaatctctagctctggagttacagagaaatggctgtttactctgcaccagact 189
Query: 121 cagctaagttgttaaaaggcactgaggccatggccctaccctcgtgattctaacttaaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 188 cagctaagttgttaaaaggcactgaggccatggccctaccctcgtgattctaacttaatg 129
Query: 181 gacgtggtgggtgacatgggtggggtctgggccatagtaggtattaaaagacctacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gacgtggtgggtgacatgggtggggtctgggccatagtaggtattaaaagacctacagag 69
Query: 241 ttgag 245
|||||
Sbjct: 68 ttgag 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
