Query= MSMg01no074_b19.b1 MSMg01no074_b19.b1 CHROMAT_FILE:
MSMg01no074_b19.b1 PHD_FILE: MSMg01no074_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:23 2005
(318 letters)
>mm_chr9_115617259_115617976
Length = 718
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%)
Strand = Plus / Plus
Query: 5 gaattcttaggatatatataaaaccaagtaacattctgcagggcaatatacacaaacccg 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattcttaggatatatataaaaccaagtaacattctgcagggaaatatacacaaacccg 264
Query: 65 agggcctcttccctgcaggactgtggaaggaaatggaaatcaaccaaatgaggacagcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agggcctcttccctgcaggactgtggaaggaaatggaaatcaaccaaatgaggacagcaa 324
Query: 125 aagcagcctgcatggacaaaggcgtagccgcagtcacttacagattggagcatgctcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagcagcctgcatggacaaaggcgtagccgcagtcacttacagattggagcatgctcagg 384
Query: 185 acgggagaaaggggggaggaaagagagctgtctgaatctggcacagagacgctgtgggtg 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 acgggagaaaggggggaggaaagagagctgtctaaatctggcacagagacgctgtgggtg 444
Query: 245 gttcattaggaagagaggcactccctctgattgtttagcagcgtgcatttggctttctct 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 gttcattaggaagagaggcactccctctgattggttagcagcgtgcatttggctttctct 504
Query: 305 gattggatgcactt 318
||||||||||||||
Sbjct: 505 gattggatgcactt 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_b19.g1 MSMg01no074_b19.g1 CHROMAT_FILE:
MSMg01no074_b19.g1 PHD_FILE: MSMg01no074_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:23 2005
(283 letters)
>mm_chr9_115771083_115771766
Length = 684
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 caggcttacaggattatattttccaaag-agcatactgatgggtcttggtgggtgggcat 59
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 484 caggcttacaggattatattttccaaagtagcatcctgatgggtcttggtgggtgggcat 425
Query: 60 taagaagcacctggaatggagggtcttccgtttggttgcggttccaccctaattagctcg 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 taagaagtacctggaatggagggtcttccgtttggttgcggttccaccctaattagctcg 365
Query: 120 ggaacattctctgtgcccccctttgcctttctctttatatcccacaacccagcagtgaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggaacattctctgtgcccccctttgcctttctctttatatcccacaacccagcagtgaac 305
Query: 180 aaagctcggagttcctgctgatgttgtgtttgatgaatgaataaacgcacttaagctggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaagctcggagttcctgctgatgttgtgtttgatgaatgaataaacgcacttaagctggt 245
Query: 240 aacatctcttgcttctcaacattttaataagggggaaaaatagt 283
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aacatctcttgcttctcaacattttaataagggggaaaaatagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
