Query= MSMg01no074_i13.b1 MSMg01no074_i13.b1 CHROMAT_FILE:
MSMg01no074_i13.b1 PHD_FILE: MSMg01no074_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:55 2005
(411 letters)
>mm_chr9_80740877_80741686
Length = 810
Score = 741 bits (383), Expect = 0.0
Identities = 401/407 (98%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 5 gaattctttctcctcctgatgtcccaccttttatttcctgcctaagccacaggctatagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttctcctcctgatgtcccaccttttatttcctgcctaagccacaggctatagg 264
Query: 65 ctttttatttgctaggtgatgcatccatacaacatacaagatattctttgtacaggtacg 124
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttttaattgataggtgatgcatccatacaacatacaagatattctttgtacaggtacg 324
Query: 125 attgccttgggatgcctctgcatggtgcaacctatggctccagccacatatgtagcagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgccttgggatgcctctgcatggtgcaacctatggctccagccacatatgtagcagag 384
Query: 185 gatagccttgtcagacatcaatgggaggagggacccttggttctatgttaaagaaaattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatagccttgtcagacatcaatgggaggagggacccttggttctatgttaaagaaaattt 444
Query: 245 ccctacatttttttaaaagtccagctctagtgtttatttttctgacaatagcaaaaatgg 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 ccctacatttttttaaaagtccagttctagtgtttatttttctgacaatagcaaaaatgg 504
Query: 305 tgtatacgcgagggaaaggggcaatatgagtccccagtgggcaatagctgaatttcttct 364
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtatatg-gagggaaaggggcaatatgagtccccagtgggcaatagctgaatttcttct 563
Query: 365 tgctgccctagcctcactgtgcaaaaggattcagttaaatagccatc 411
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgctgccttagcctcactgtgcaaaaggattcagttaaatagccatc 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 810
Length adjustment: 9
Effective length of query: 402
Effective length of database: 801
Effective search space: 322002
Effective search space used: 322002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_i13.g1 MSMg01no074_i13.g1 CHROMAT_FILE:
MSMg01no074_i13.g1 PHD_FILE: MSMg01no074_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:56 2005
(229 letters)
>mm_chr9_80880529_80881157
Length = 629
Score = 441 bits (228), Expect = e-128
Identities = 228/228 (100%)
Strand = Plus / Minus
Query: 1 cctgtttgataatatccagtgcttcttggtgactgcactgagttcttcatagatagactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctgtttgataatatccagtgcttcttggtgactgcactgagttcttcatagatagactt 369
Query: 61 gttttaaattataatcagtacatcactttcatctgacactttatggctaaacctagagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gttttaaattataatcagtacatcactttcatctgacactttatggctaaacctagagct 309
Query: 121 ttctctgaattgtgaaagcaggagctgtgtcacctataataaatagcagcttattgactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttctctgaattgtgaaagcaggagctgtgtcacctataataaatagcagcttattgactc 249
Query: 181 taatctactgccaccaaaacaccaggagcagaaaaggaataaaacatg 228
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 taatctactgccaccaaaacaccaggagcagaaaaggaataaaacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
