Query= MSMg01no074_n04.b1 MSMg01no074_n04.b1 CHROMAT_FILE:
MSMg01no074_n04.b1 PHD_FILE: MSMg01no074_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:19 2005
(574 letters)
>mm_chr9_70819151_70820125
Length = 975
Score = 1064 bits (550), Expect = 0.0
Identities = 565/570 (99%), Gaps = 1/570 (0%)
Strand = Plus / Plus
Query: 6 gaattctgaaggacag-agtacacagaggaacaatgttcagacatttgaagatttgtgta 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgaaggacagtagtacacagaggaacaatgttcagacatttgaagatttgtgta 265
Query: 65 tgtaatacatacaaatgctggagcccatgacaacaacagggaaacacagatctaaaagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgtaatacatacaaatgctggagcccatgacaacaacagggaaacacagatctaaaagta 325
Query: 125 taatgttattattttgtgttctgttgtcttaggtttacaggcaaaacaaacctcttaaaa 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaatgttattattttgtgttctgttgtcttaggtttacaggcaaaacaaacctcttaaaa 385
Query: 185 tctaacaagccgatcatgcatgatgggcacaggcaatgaattgttgcaaacagagtaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctaacaagccgatcatgcatgatgggcacaggcaatgaattgttgcaaacagagtaatt 445
Query: 245 cctctggagtcttagagggacgggaaaggagcaagctgggactggaagaagtctagattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cctctggagtcttagagggacgggaaaggagcaagctgggactggaagaagtctagattt 505
Query: 305 atgatatattaggttttctctttctttacagtgccttcctgggccagaaattgagttcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atgatatattaggttttctctttctttacagtgccttcctgggccagaaattgagttcaa 565
Query: 365 ttatatctcacaaatatttatcagacttgagtaggcagagtcctggcaaccagggatgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttatatctcacaaatatttatcagacttgagtaggcagagtcctggcaaccagggatgtg 625
Query: 425 gtctttgctcttgccagacagctttgtcttaccccgagttcaaggacggctttaatcttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtctttgctcttgccagacagctttgtcttaccccgagttcaaggacggctttaatcttt 685
Query: 485 ctcttattctaggagtcagtttgaagaaccatcagctcaggaagccctttattaagcata 544
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 686 ctcttattctaggagtcagtttgaagaaccatcagcttaggaagccctttattaagtata 745
Query: 545 ctcttataccagctgcagagcagtgcctgg 574
|||||||||||||||||| |||||||||||
Sbjct: 746 ctcttataccagctgcagggcagtgcctgg 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 975
Length adjustment: 10
Effective length of query: 564
Effective length of database: 965
Effective search space: 544260
Effective search space used: 544260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_n04.g1 MSMg01no074_n04.g1 CHROMAT_FILE:
MSMg01no074_n04.g1 PHD_FILE: MSMg01no074_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:19 2005
(562 letters)
>mm_chr9_70978524_70979485
Length = 962
Score = 731 bits (378), Expect = 0.0
Identities = 387/390 (99%)
Strand = Plus / Minus
Query: 2 tacaagttgagatgaaagcaccgggccaaccatgggctttctgcttctacttcatcatcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tacaagttgagatgaaagcaccgggccaaccatgggctttctgcttctacttcatcatcc 331
Query: 62 tggggtcctcctggggggctctctgaggctatctcaccataaggattgcttggcttttat 121
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 330 tggggtcgtcctggggggctctctgaggctatctcaccataaagattgcttggcttctat 271
Query: 122 tgatttgctcaagaccaagcatgggtctctgttcccctttgatttctgctgctgtgatag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgatttgctcaagaccaagcatgggtctctgttcccctttgatttctgctgctgtgatag 211
Query: 182 aggagagtgcacagcccctcaccctattcaaagtcaaagcaggagctcaaagcaagaact 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aggagagtgcacagcccctcaccctattcaaagtcaaagcaggagctcaaagcaagaact 151
Query: 242 tgaaacagaaaatatggagggacagtgcttgctggcttgctcacaggctcatctatagaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tgaaacagaaaatatggagggacagtgcttgctggcttgctcacaggctcatctatagaa 91
Query: 302 atttttcttatacagtctagaatgaacacctggaagaatggtaccactctccagtggtat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atttttcttatacagtctagaatgaacacctggaagaatggtaccactctccagtggtat 31
Query: 362 ggaccctcccccatcaattaataagcaaga 391
||||||||||||||||||||||||||||||
Sbjct: 30 ggaccctcccccatcaattaataagcaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
