Query= MSMg01no076_d15.b1 MSMg01no076_d15.b1 CHROMAT_FILE:
MSMg01no076_d15.b1 PHD_FILE: MSMg01no076_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:07 2005
(329 letters)
>mm_chr9_59735680_59736408
Length = 729
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Minus
Query: 1 aaacaaaacggtggccagcaactgaatgaggttgacctttgatctctacatacatgctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaacaaaacggtggccagcaactgaatgaggttgacctttgatctctacatacatgctcc 270
Query: 61 tgcacacatataccagtacactcatgcatttacattgtacacgcatattaaaaaaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgcacacatataccagtacactcatgcatttacattgtacacgcatattaaaaaaagaaa 210
Query: 121 aggcccaatacaactggagtggggactatcacaaaagctgttgcctatatgagggataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aggcccaatacaactggagtggggactatcacaaaagctgttgcctatatgagggataca 150
Query: 181 ttcttctagttgggcttccttgtctggcctcagtgggagagaaagtacctagcttcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ttcttctagttgggcttccttgtctggcctcagtgggagagaaagtacctagcttcacag 90
Query: 241 aaattttaagtgccagggtgggaggaataatgaaggagaggccccacctgctcagaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaattttaagtgccagggtgggaggaataatgaaggagaggccccacctgctcagaggag 30
Query: 301 aaggaaaggaggaatggcggaaggattgt 329
||||||||||||||||| |||||||||||
Sbjct: 29 aaggaaaggaggaatgggggaaggattgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_d15.g1 MSMg01no076_d15.g1 CHROMAT_FILE:
MSMg01no076_d15.g1 PHD_FILE: MSMg01no076_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:07 2005
(219 letters)
>mm_chr9_59594312_59594930
Length = 619
Score = 337 bits (174), Expect = 4e-97
Identities = 205/220 (93%), Gaps = 14/220 (6%)
Strand = Plus / Plus
Query: 1 attccaggacagccagggctatacagagaaaccctgtctcgaaaaac-ataaacacaaac 59
||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||
Sbjct: 213 attccaggacagccagggctatacagagaaaccctgtctcgaaaaaccaaaaa-a-aaa- 269
Query: 60 aaaaacaaaaaaaaaaccaaaaaaaaaaaaaacccccccaaaaaaaaagagaaacaggta 119
||||| |||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 270 aaaaa-aaaaaaaaaa--aaaaaaaaaaaaaa-------aaaaaaaaagagaaacaggta 319
Query: 120 tcctgatttcaagtccaacatttatacacacaagtatagatgcaatctgatcaggaaact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcctgatttcaagtccaacatttatacacacaagtatagatgcaatctgatcaggaaact 379
Query: 180 gttattaatatctttgagcacatgattaggtattttgctt 219
||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttattaatatctttgagcacatgattaggtattttgctt 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
