Query= MSMg01no082_p09.b1 MSMg01no082_p09.b1 CHROMAT_FILE:
MSMg01no082_p09.b1 PHD_FILE: MSMg01no082_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:33 2005
(658 letters)
>mm_chr9_102025243_102026292
Length = 1050
Score = 1181 bits (611), Expect = 0.0
Identities = 641/655 (97%), Gaps = 8/655 (1%)
Strand = Plus / Minus
Query: 4 ggaattctgaagttaacgttagaaaagtcgttccatggtctcctagtcagtcgtcaccct 63
|||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 850 ggaattctgaagttaaggttagaaaagtcgttcgatggtctcctagtcagtcttcaccct 791
Query: 64 ctttaactcatgtggtctttgtccagcttgtcacagacttctcatatgccccctcctaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ctttaactcatgtggtctttgtccagcttgtcacagacttctcatatgccccctcctaca 731
Query: 124 gtcttgctcctcttacgatcctccctgaaataaggtgcgagggctgagttagtcatttgc 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 730 gtcttgctcctcttacgatcctccctgaaataaggtgtgagggctgagttagtcatttgc 671
Query: 184 cacctcagaggctagtccccacttgtttgacacagcctggccaagccatggttataagta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cacctcagaggctagtccccacttgtttgacacagcctggccaagccatggttataagta 611
Query: 244 accctgaggcaggagctacaagagctcagagaataatgtcactgctctagcaggtcactg 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 610 accctgaggcaggagctacaagagctcagagaataatgtcactactctagcaggtcattg 551
Query: 304 ctctgcccagccccaaagataatgagaaggagggctctttctaaaccataaggcactcta 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 550 ctctgcccagccccaaagat---gagaaggagggctctttctaaaccataaggcactcta 494
Query: 364 tctatattcgaaaggcattcttctgggtagggtgaggaggagaaatccgcctgaatcctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tctatattcgaaaggcattcttctgggtagggtgaggaggagaaatccgcctgaatcctc 434
Query: 424 gtgataacaattttacatctataattccttcctcttcctacagcattggaatttgatggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtgataacaattttacatctataattccttcctcttcctacagcattggaatttgatggg 374
Query: 484 gattagcagtggccagctgcagaatgccagagccccttaggaaaggctcagctaggactt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gattagcagtggccagctgcagaatgccagagccccttaggaaaggctcagctaggactt 314
Query: 544 tacttaatgaatactttcagaggggattttcttttgtgacaaaaaaaaaaaaaaaaaggc 603
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 313 tacttaatgaatactttcagaggggattttcttttgtgacaaaaaaaaaaaa-----ggc 259
Query: 604 tgctgctaagagatgggttccactgcctgaggccccttcctggggcttctgaggt 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgctgctaagagatgggttccactgcctgaggccccttcctggggcttctgaggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1050
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1040
Effective search space: 673920
Effective search space used: 673920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_p09.g1 MSMg01no082_p09.g1 CHROMAT_FILE:
MSMg01no082_p09.g1 PHD_FILE: MSMg01no082_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:33 2005
(636 letters)
>mm_chr9_101920830_101921866
Length = 1037
Score = 1172 bits (606), Expect = 0.0
Identities = 630/638 (98%), Gaps = 2/638 (0%)
Strand = Plus / Plus
Query: 1 tcagccgaggaataccgaagggctgagaagcaattgaaaaaaa-tattcaacatccttaa 59
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 200 tcagccgaggaataccgaagggctgagaagcaattgaaaaaaaatattcaacatccttaa 259
Query: 60 tcatcagggaaatgcagatcaaaacaaccctgagattccacctggggtgacagcagatac 119
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 260 tcatcagggaaatgcagatcaaaacaaccctaagattccacctcaggtgacagcagatac 319
Query: 120 tggcaaggatgtggagaaagaggaacactcctccattgcttgtgggattgcaagcttgta 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggcgaggatgtggagaaagaggaacactcctccattgcttgtgggattgcaagcttgta 379
Query: 180 caaccactctggaaatcagtctggtggtgcctcagaaaactgggcatagtactactggta 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 caaccactctggaaatcagtctggtggtacctcagaaaactgggcatagtactactggta 439
Query: 240 gatgcagcaatacctctcctgggcatatacccagaagatgttccaactagttataacgac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatgcagcaatacctctcctgggcatatacccagaagatgttccaactagttataacgac 499
Query: 300 acatgctccactatgttcatagaagccctatttataatagccagaagctggaaagaaccc 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acatgttccactatgttcatagaagccctatttataatagccagaagctggaaagaaccc 559
Query: 360 agatgtccctcaacagaaaaattaattcttaactcttgcatttgctcatctactctttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agatgtccctcaacagaaaaattaattcttaactcttgcatttgctcatctactctttta 619
Query: 420 aagaaaaaaaaa-ctcactagaatattttctttttgtcattttcccctttgttgttttcc 478
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagaaaaaaaaaactcactagaatattttctttttgtcattttcccctttgttgttttcc 679
Query: 479 attttaaaatcttttattttgattttccctctcatttgttgttccttttttgcatgtttc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attttaaaatcttttattttgattttccctctcatttgttgttccttttttgcatgtttc 739
Query: 539 atcttttctttttcagcactcagaacaggagaaataaagaccctcaagataaacatgaac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atcttttctttttcagcactcagaacaggagaaataaagaccctcaagataaacatgaac 799
Query: 599 taaaacaattcatgacattatgtcagcattataggaga 636
||||||||||||||||||||||||||||||||||||||
Sbjct: 800 taaaacaattcatgacattatgtcagcattataggaga 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
