Query= MSMg01no083_e06.b1 MSMg01no083_e06.b1 CHROMAT_FILE:
MSMg01no083_e06.b1 PHD_FILE: MSMg01no083_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:57 2005
(415 letters)
>mm_chr9_29506284_29507098
Length = 815
Score = 725 bits (375), Expect = 0.0
Identities = 402/411 (97%)
Strand = Plus / Minus
Query: 5 gaattcctaaagctgctgcgctggctagttcagtgtgcatggtgtcaaatggcaggtgac 64
||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 615 gaattcctaaagctggtgggctggctagatcagtgtgcatggtgtcaaatggcaggtgac 556
Query: 65 aactggtacccaaggctataatctccatatacacttatcatggcatgaacatacaaatgc 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 555 aactggtacccaaggctatgatctccatatacacttatcatggcatgaacatacaaacga 496
Query: 125 atacatgcacacactgaaaattatgggcctatatgtacataaagtacatgcatttgatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 495 atacatgcacacactgaaaattatgggcctatatgtacataaagtacatgcgtttgatat 436
Query: 185 atgcatattctcaattaaatatattgaaccataattctgcagcaattcttcatagacaaa 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 435 atgcatattctcaattaaatatattgaaccataattctgcagcaattcttcacagacaaa 376
Query: 245 ggctaggagaatcaacaaggaggccttgagtttcactctggtcttaaatggagaaagtcc 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 375 ggctaggagaatcaacaaggaggccttgagtttcactctgatcttaaatggagaaagtcc 316
Query: 305 aaatttccaatcttggcccagaagttaacatttttaagctgtcctttttttgtctgtaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaatttccaatcttggcccagaagttaacatttttaagctgtcctttttttgtctgtaaa 256
Query: 365 agtgaataatcactttatgtgttcttctgggacatgatcagcatgacccag 415
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agtgaataatcactttatgtgttcttctgggacatgatcagcatgacccag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_e06.g1 MSMg01no083_e06.g1 CHROMAT_FILE:
MSMg01no083_e06.g1 PHD_FILE: MSMg01no083_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:57 2005
(462 letters)
>mm_chr9_29351330_29352191
Length = 862
Score = 888 bits (459), Expect = 0.0
Identities = 462/463 (99%), Gaps = 1/463 (0%)
Strand = Plus / Plus
Query: 1 tgggatagagctac-caggagcttgggcagggaagatgtaatgagaaggacacacaggta 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgggatagagctacacaggagcttgggcagggaagatgtaatgagaaggacacacaggta 259
Query: 60 accagccatgtgggggaaagtaggttaaaaataaatgggctatctttagttgtgatctag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 accagccatgtgggggaaagtaggttaaaaataaatgggctatctttagttgtgatctag 319
Query: 120 tcagagaagtgactagctgtatggccaaggtatctgtaaatatattttgagtctcagttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcagagaagtgactagctgtatggccaaggtatctgtaaatatattttgagtctcagttt 379
Query: 180 tatttctgggagcatggagctgggaggaagaacagggacctaacctctacttttaatggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tatttctgggagcatggagctgggaggaagaacagggacctaacctctacttttaatggt 439
Query: 240 accaggaactggttctacattctttaacttaaagcttatgtcagttttattaaatataca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 accaggaactggttctacattctttaacttaaagcttatgtcagttttattaaatataca 499
Query: 300 ttgccattcacagttctggatgaatagctcaaggattagtgagatttaatatcttgtttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgccattcacagttctggatgaatagctcaaggattagtgagatttaatatcttgtttc 559
Query: 360 agattaatcaatttgaatgcagaacatcactgcaaactctgagtatcttctgaaggtctc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agattaatcaatttgaatgcagaacatcactgcaaactctgagtatcttctgaaggtctc 619
Query: 420 tttacttgatagttggtttgctcttctatttggtcagttacaa 462
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttacttgatagttggtttgctcttctatttggtcagttacaa 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
