Query= MSMg01no083_i02.b1 MSMg01no083_i02.b1 CHROMAT_FILE:
MSMg01no083_i02.b1 PHD_FILE: MSMg01no083_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:15 2005
(601 letters)
>mm_chr9_22473179_22474180
Length = 1002
Score = 1052 bits (544), Expect = 0.0
Identities = 585/602 (97%), Gaps = 9/602 (1%)
Strand = Plus / Plus
Query: 5 gaattccagtc---tcttcata-ataaccatctggataacctagttaattccttaaagtc 60
||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattccagtctcttcttcatacataaccatctggatgtcctagttaattccttaaagtc 264
Query: 61 ttctgagatatggtttgtttgtttgttta-ttacaaaatgatgacatcattgtcctgtga 119
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 265 ttctgagatatggtttgtttgtttgtttatttacaaaatgatgacatcattgccctgtga 324
Query: 120 gacagttgaagtttatttaactgaaaatgtggttgttacaagagcctggtgtgtattagg 179
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 gacagttgaag----tttaactgaaagtgtggttgttacaagagcctggtgtgtattagg 380
Query: 180 tccctgaagaacaggaaaattgaactagatagagaaggatgtatgtagtatgagttctag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccctgaagaacaggaaaattgaactagatagagaaggatgtatgtagtatgagttctag 440
Query: 240 ctatcacagttaatgtatttcctgatccttgtgtgagtcactggaattctgtgcctttgt 299
|| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtcacagttcatgtgtttcctgatccttgtgtgagtcactggaattctgtgcctttgt 500
Query: 300 cttttttattatgacaagaatccttgtacacccacagtccttggctgatgtaatggatgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttttttattatgacaagaatccttgtacacccacagtccttggctgatgtaatggatgc 560
Query: 360 cattgttacagataccgtcaacctcatgtcattgttggcattgtcgtcacagccaccatc 419
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 cattgttacagataccgtcaacctcatgtcattgttggcattgccgtcacagccaccatc 620
Query: 420 actagagagtacacacatagataggatcttttggtcctcaagtttcagggaatacaggga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actagagagtacacacatagataggatcttttggtcctcaagtttcagggaatacaggga 680
Query: 480 acatgattttctctttaaggaagtgtcaagtttaaacatcctttcacgttgagaaagttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acatgattttctctttaaggaagtgtcaagtttaaacatcctttcacgttgagaaagttt 740
Query: 540 tacaaaagcagtgatcctgattgtagtgattcctgtagaatatgttttatgtcacagcag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tacaaaagcagtgatcctgattgtagtgattcctgtagaatatgttttatgtcacagcag 800
Query: 600 tg 601
||
Sbjct: 801 tg 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1002
Length adjustment: 10
Effective length of query: 591
Effective length of database: 992
Effective search space: 586272
Effective search space used: 586272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_i02.g1 MSMg01no083_i02.g1 CHROMAT_FILE:
MSMg01no083_i02.g1 PHD_FILE: MSMg01no083_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:15 2005
(314 letters)
>mm_chr9_22638102_22638815
Length = 714
Score = 598 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Minus
Query: 1 cagataagagctccaaacgcgggcaaggagtgaactgatgaagagcgagccagcagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cagataagagctccaaacgcgggcaaggagtgaactgatgaagagcgagccagcagagag 450
Query: 61 caggaaggcatgctgtggagtaagggactcaagatgcaaataaaagggtgttgctctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caggaaggcatgctgtggagtaagggactcaagatgcaaataaaagggtgttgctctctc 390
Query: 121 tttggtaaataacgtgtgtgggcgtgtgtgcacatgcacgtattcgcgtgtacacataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tttggtaaataacgtgtgtgggcgtgtgtgcacatgcacgtattcgcgtgtacacataca 330
Query: 181 ctcacacatacacacggcggcgggggggagggggatagcattataaaaagcagtcttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctcacacatacacacggcggcgggggggagggggatagcattataaaaagcagtcttcag 270
Query: 241 tatttaaagcaagattcagcaacataatgaagtatttttaattgatgaattccaggcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tatttaaagcaagattcagcaacataatgaagtatttttaattgatgaattccaggcatt 210
Query: 301 ggggggggg 309
|||||||||
Sbjct: 209 ggggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
