Query= MSMg01no084_a20.b1 MSMg01no084_a20.b1 CHROMAT_FILE:
MSMg01no084_a20.b1 PHD_FILE: MSMg01no084_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:58 2005
(636 letters)
>mm_chr9_10714313_10715348
Length = 1036
Score = 1143 bits (591), Expect = 0.0
Identities = 618/631 (97%), Gaps = 7/631 (1%)
Strand = Plus / Plus
Query: 5 gaattctaaactgtcgttacttttatttttcaggatctgtgcatggatagtctagtctct 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaactgttgttacttttatttttcaggatctgtgcatggatagtctagtctct 264
Query: 65 gattggcaaagactcttccctttttcaagtattaccttttgtcaatgcaatacttaattg 124
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 265 gattggcaaagactcttccctttgtcaagtattaccttttatcaatgcaatacttaattg 324
Query: 125 tatactttgaattatgtttatatttagtgtaaagagccagtcagtttgctaacatcaggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatactttgaattatgtttatatttagtgtaaagagccagtcagtttgctaacatcaggt 384
Query: 185 ttggggattagtatctcctcagtactgtttttgtgctaagtctttttccatacagacctt 244
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 ttggggattagtgtctcctcagtagtgtttttgtgctaagtctttttccatacagacctt 444
Query: 245 tgagatccaaggatatacacttaaccttataatctgggacctgtcagcgttctcagccat 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgagatccaaggatatacaattaaccttataatctgggacctgtcagcgttctcagccat 504
Query: 305 cctcgctgtgtataatgctttgaagacattttaggaacaaacaaaacttccatttttata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctcgctgtgtataatgctttgaagacattttaggaacaaacaaaacttccatttttata 564
Query: 365 ttatggctgcttcccaggaacctgtatctggccttgggacatttgtattctacttaatga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttatggctgcttcccaggaacctgtatctggccttgggacatttgtattctacttaatga 624
Query: 425 taattaactttcctatggcaatctatacctgattttactgttaaactgcaagctttttgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taattaactttcctatggcaatctatacctgattttactgttaaactgcaagctttttgt 684
Query: 485 aaacctctggcattagagccaacttgatcataatcaatctgccaattttagcagtgtctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaacctctggcattagagccaacttgatcataatcaatctgccaattttagcagtgtctg 744
Query: 545 gtgactaatagtcttttctttgccagatattttataatgagagtcagttatgtgcaaaag 604
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 745 gtgactaatagtcttttctttgccagatattttataatgagagtcagtta-------aag 797
Query: 605 gggtaatcaatattattatgatatctatgat 635
|||||||||||||||||||||||||||||||
Sbjct: 798 gggtaatcaatattattatgatatctatgat 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_a20.g1 MSMg01no084_a20.g1 CHROMAT_FILE:
MSMg01no084_a20.g1 PHD_FILE: MSMg01no084_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:58 2005
(622 letters)
>mm_chr9_10821382_10822402
Length = 1021
Score = 1156 bits (598), Expect = 0.0
Identities = 616/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Minus
Query: 1 cattggcaaggaaaactgttatgacatctaggtaacacatctcagtgtgaagattccaag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 821 cattggcaaggaaaactgttatgacatctaggtaacacatttcagtgtgaagattccaag 762
Query: 61 tccaactaataagttgtctgtcaagaaaggcatgaaacaaatataaaacctcttaagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tccaactaataagttgtctgtcaagaaaggcatgaaacaaatataaaacctcttaagtct 702
Query: 121 gcaatatccaaacagaaacacaggatttttatttccatttttacaaatttaagattatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gcaatatccaaacagaaacacaggatttttatttccatttttacaaatttaagattatct 642
Query: 181 gttataactatacatgctacattaaactggagcctaataatataatgcatgtagttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gttataactatacatgctacattaaactggagcctaataatataatgcatgtagttctct 582
Query: 241 gctaacttctacaggcagatatttcttgtgtattgctttattcattcatccattaattca 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gctaacttctacatgcagatatttcttgtgtattgctttattcattcatccattaattca 522
Query: 301 ccaaatcttgattaaatagagtaagtaatacaaatcaggagtctcacttctatgcttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ccaaatcttgattaaatagagtaagtaatacaaatcaggagtctcacttctatgcttcca 462
Query: 361 atggccaggaaagaatagggaattaagtgtgtatgtatatttatgcataaattcaggcag 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 461 atggccaggaaagaatagggaa-taagtgtgtatgtatatttatgcataaattcaggcag 403
Query: 421 aaaacaaaatattacccactatgatacaggttatgggggaagtaaggtcaaaaatgaaat 480
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 402 aaaacaaaatattacccactatgatacaggttatgtgagaagtaaggtcaaaaatgaaat 343
Query: 481 atatgagagaaaattgttcacagggggaaatgattggtgataattgttaatggaataagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atatgagagaaaattgttcacagggggaaatgattggtgataattgttaatggaataagt 283
Query: 541 caaccatgtagaaggcattccagctgaagaaacagccacagcatggacattaattaaggt 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 caaccatgtagaaagcattccagctgaagaaacagccacagcatggacattaattaaggt 223
Query: 601 gaacataagctaagttgcttta 622
||||||||||||||||||||||
Sbjct: 222 gaacataagctaagttgcttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
