Query= MSMg01no084_i15.b1 MSMg01no084_i15.b1 CHROMAT_FILE:
MSMg01no084_i15.b1 PHD_FILE: MSMg01no084_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:35 2005
(149 letters)
>mm_chr9_64394530_64395075
Length = 546
Score = 238 bits (123), Expect = 1e-67
Identities = 142/149 (95%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 1 aagatagtgtctggaagccccgccccctgccccgccccccagacctaccgtctacttagc 60
||||||||||||| ||| || ||||| ||||||||||||||||||||||||||| ||||
Sbjct: 346 aagatagtgtctgaaag--ccaccccc-gccccgccccccagacctaccgtctacatagc 290
Query: 61 actgaggcagctataagcacaggacctgggagagcctgaggcttcatcccctccctcaca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 actgaggcagctgtaagcacaggacctgggagagcctgaggcttcatcccctccctcaca 230
Query: 121 ggccacccttgctctttggaagaggtagc 149
|||||||||||||||||||||||||||||
Sbjct: 229 ggccacccttgctctttggaagaggtagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 546
Length adjustment: 8
Effective length of query: 141
Effective length of database: 538
Effective search space: 75858
Effective search space used: 75858
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_i15.g1 MSMg01no084_i15.g1 CHROMAT_FILE:
MSMg01no084_i15.g1 PHD_FILE: MSMg01no084_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:35 2005
(113 letters)
>mm_chr9_64210937_64211449
Length = 513
Score = 211 bits (109), Expect = 1e-59
Identities = 112/113 (99%)
Strand = Plus / Plus
Query: 1 ctatgcacttccggcagctgaaagttatttagatgaagtctaactactctgctagagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatgcacttccggcagctgaaagttatttagatgaagtctaactactctgctagagatt 260
Query: 61 ctaggtgaaaagactacgtgaagttgtgtgtgatggtcatgaatgtgctttat 113
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ctaggtgaaaagactacgtgaagttgtgtgtgatgggcatgaatgtgctttat 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 113
Length of database: 513
Length adjustment: 8
Effective length of query: 105
Effective length of database: 505
Effective search space: 53025
Effective search space used: 53025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
