Query= MSMg01no085_a13.b1 MSMg01no085_a13.b1 CHROMAT_FILE:
MSMg01no085_a13.b1 PHD_FILE: MSMg01no085_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:15 2005
(416 letters)
>mm_chr9_10558607_10559422
Length = 816
Score = 762 bits (394), Expect = 0.0
Identities = 411/418 (98%), Gaps = 4/418 (0%)
Strand = Plus / Plus
Query: 1 ataactcaaaatttcactacaacattgaatgtattcctt--cttgatgacattctactct 58
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 201 ataactcaaaatttcactacaacattgaatgtatt--tttccttgatgacattctactct 258
Query: 59 aattattggtttgggaatgtgatgtaatgcctatgtttatgacctcagagtgtctcttgg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aattattggtttgggaatgtgatgtaatgcctatgtttatgacctcagagtgtctcttgg 318
Query: 119 tatttaataatcaattggagcattctcttgagaaaattgtttctcttgctctcagaattc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tatttaataatcaattggagcattctcttgagaaaattgtttctcttgctctcagaattc 378
Query: 179 accactttctcaaagctctttgtctggaattgaagccccttgagcattgttaaccatggc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 accactttctcaaagctctttgtctggaattgaagccccttgagcattgttaaccatggc 438
Query: 239 cattctcttcatttctggtttgtccttcacaattgtatctggacaggtggctgagccctc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cattctcttcatttctggtttgtccttcacaattgtatctggacaggtggctgagccctc 498
Query: 299 attgttcagactctcagaaagagctttttttctaaaactcaggtaacttcacttcttttc 358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 499 attgttcagactctcagaaagagcttttccactaaaactcaggtaacttcacttcttttc 558
Query: 359 aactcaaagtttttaagtcattttcacatgggctaatcttaggagtgtgttgataagt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aactcaaagtttttaagtcattttcacatgggctaatcttaggagtgtgttgataagt 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_a13.g1 MSMg01no085_a13.g1 CHROMAT_FILE:
MSMg01no085_a13.g1 PHD_FILE: MSMg01no085_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:16 2005
(273 letters)
>mm_chr9_10712084_10712756
Length = 673
Score = 497 bits (257), Expect = e-145
Identities = 269/273 (98%)
Strand = Plus / Minus
Query: 1 cagatgataagaacagatgtgtcaaaatcttgatgtgttcagtacaataaaaaagaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 473 cagatgataagaacagatgtgtcaaaatcttgatgtgttcagtacaataaaaaagacaaa 414
Query: 61 gtaagtatttagtaactgtgataattaattggcaaaggaaaccaaactttatcaggagta 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 413 gtaagtatttagtaactgtgataattaattggcaaaggaagccaaactttatcaggagta 354
Query: 121 ctgaaagacacaacagtgtaattattactacaaatcattgagcattaattacatgccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctgaaagacacaacagtgtaattattactacaaatcattgagcattaattacatgccagg 294
Query: 181 aatattctaattttttaaaaagattatgacattattcaaaattcaaaatatttctcagta 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aatattctaattctttaaaaagattatgacattattcaaaattcaaaatatttctcagta 234
Query: 241 gagataaaatttcctcttttatatgtgaagtta 273
|||||||||||||||||||||||||||||||||
Sbjct: 233 gagataaaatttcctcttttatatgtgaagtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
