Query= MSMg01no091_m04.b1 MSMg01no091_m04.b1 CHROMAT_FILE:
MSMg01no091_m04.b1 PHD_FILE: MSMg01no091_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:22 2005
(256 letters)
>mm_chr9_69638036_69638691
Length = 656
Score = 456 bits (236), Expect = e-133
Identities = 251/256 (98%)
Strand = Plus / Minus
Query: 1 tcagacgaactagtaaactatacagttatttactcccttaaaataataatgtcaacttag 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcagacaaactagtaaactatacagttatttactcccttaaaataataatgtcaacttag 256
Query: 61 ttgggtttaaatcgcatgcaaacctctgagcaacacaatgacaagttaaaagtttagccg 120
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 255 ttgggtttaaatcgcatacaaacctctgagcaatacaatgacaagttaaaagtttagccg 196
Query: 121 ggcagtggtggcgcacacctttaatcccagcacttgggaggcagaggcaggcagatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggcagtggtggcgcacacctttaatcccagcacttgggaggcagaggcaggcagatttct 136
Query: 181 gagtttgaggccagcctggtttacagagtgagttccaggacatccagggctatacagata 240
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 135 gagtttgaggccagcctggtttacagagtgagttccaggacagccagggctatacagaga 76
Query: 241 aaccctgtcttgaaaa 256
||||||||||||||||
Sbjct: 75 aaccctgtcttgaaaa 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_m04.g1 MSMg01no091_m04.g1 CHROMAT_FILE:
MSMg01no091_m04.g1 PHD_FILE: MSMg01no091_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:23 2005
(330 letters)
>mm_chr9_69589453_69590181
Length = 729
Score = 607 bits (314), Expect = e-178
Identities = 326/330 (98%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 caggactgccccgatccaggctctccgtctctgtgttgcatctttcgcccagaatgtttc 60
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 201 caggactgccccgatccaggctctccgtctctgtgttgcatcttt-gaacagaatgtttc 259
Query: 61 aatatttccagaagctgtgttgagagaagccagattcaagctccagagggctgaaaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatatttccagaagctgtgttgagagaagccagattcaagctccagagggctgaaaatag 319
Query: 121 aagataaatttgaaagtataaatggttacgcacagacaatcgaatactaagcagcaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagataaatttgaaagtataaatggttacgcacagacaatcgaatactaagcagcaaaag 379
Query: 181 ggaaggatgggtgtcccattttcatttctgttgctgtgataaggtaacatgacaaatagc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 380 ggaaggatgggtgtcccattttcatttctgttgctgtgataaggtaacatgacaaaaagc 439
Query: 241 agcttagaggagaaatgttttattttatctcccaactcaggattaccttctcttcttagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcttagaggagaaatgttttattttatctcccaactcaggattaccttctcttcttagg 499
Query: 301 gagaaaccacagtgcaggagttaagacagc 330
||||||||||||||||||||||||||||||
Sbjct: 500 gagaaaccacagtgcaggagttaagacagc 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
