Query= MSMg01no093_a22.b1 MSMg01no093_a22.b1 CHROMAT_FILE:
MSMg01no093_a22.b1 PHD_FILE: MSMg01no093_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:10 2005
(267 letters)
>mm_chr9_9070656_9071322
Length = 667
Score = 495 bits (256), Expect = e-144
Identities = 262/264 (99%)
Strand = Plus / Minus
Query: 1 ttggctatgaccacaaaagtcatcttacatgcaagctggcccccagattaatccatttat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 415 ttggctatgaccacaaaagtcatcttacatgcaagctggccccctgattaatccatttat 356
Query: 61 tgtgcagtccccttatagaaatcttctggttccttgcactatgtataggatgtggtctgt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 355 tgtgcagtccccttatagaaatcttctggttccttgcactatctataggatgtggtctgt 296
Query: 121 actcactctgttgtttctaccataactgcccctgtacatcatgccaaagcagatattttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 actcactctgttgtttctaccataactgcccctgtacatcatgccaaagcagatattttg 236
Query: 181 taaccacccttttgatcagtctggttgtatcttctgggactggggcgatggctcaatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 taaccacccttttgatcagtctggttgtatcttctgggactggggcgatggctcaatgtc 176
Query: 241 taagaacacttaactgctcttata 264
||||||||||||||||||||||||
Sbjct: 175 taagaacacttaactgctcttata 152
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_a22.g1 MSMg01no093_a22.g1 CHROMAT_FILE:
MSMg01no093_a22.g1 PHD_FILE: MSMg01no093_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:11 2005
(373 letters)
>mm_chr9_8944100_8944872
Length = 773
Score = 675 bits (349), Expect = 0.0
Identities = 367/373 (98%)
Strand = Plus / Plus
Query: 1 ggtgagggaggggcagacaaaaaaaggagaaccatggggaaatctgcattgtaataaaaa 60
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 201 ggtgagggaggggcagacaaaaaaaggagaaagagggggaaatctgcattgtaataaaaa 260
Query: 61 gcgaaagattgtgggttgccatagaaaacaaagtgcctgtcacagggagaggactaaggt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgaaagattgtgggttgccatagaaaacaaagtgcctgtcacagggagaggactaaggt 320
Query: 121 ttaaaatggttttctgtggtgctggccacatttcgtatttatctttttatctgagcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaaatggttttctgtggtgctggccacatttcgtatttatctttttatctgagcattt 380
Query: 181 acttttcagtgacctgtattgctctacacttttcttgcgttcttagataatgaagtgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttttcagtgacctgtattgctctacacttttcttgcgttcttagataatgaagtgtaa 440
Query: 241 ctaaatacttggaaagaaaaacttaagatgattgtgtgctgaggatggttagagaagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaatacttggaaagaaaaacttaagatgattgtgtgctgaggatggttagagaagaga 500
Query: 301 ggagattatggtcattcccatatttttccttctgcttccctctctctgtctctctctttg 360
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagattatggtcattcccatatcattccttctgcttccctctctctgtctctctctttg 560
Query: 361 tgacacacacatg 373
|||||||||||||
Sbjct: 561 tgacacacacatg 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
