Query= MSMg01no095_e17.b1 MSMg01no095_e17.b1 CHROMAT_FILE:
MSMg01no095_e17.b1 PHD_FILE: MSMg01no095_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:16 2005
(583 letters)
>mm_chr9_79604226_79605208
Length = 983
Score = 1029 bits (532), Expect = 0.0
Identities = 568/580 (97%), Gaps = 5/580 (0%)
Strand = Plus / Plus
Query: 5 gaattc-acaatgtaaacataagatactggccagtcaatctccaggaagattttttttcc 63
|||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcaacaatgtaaatataagatactggccagtcaatctccaggaaga-tttttttcc 263
Query: 64 ccttaccaaatgggg-cggagggctctgacttataacactagtctatcatcttttttgtt 122
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccttaccaaatggggccgg-gggctctgacttataacactagtctatcatcttttttgtt 322
Query: 123 tgttttgtttttcgagacagggtttctctgtgtagccctggctgtcctggaactcacttt 182
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 323 tgttttgtttttcgagacagggtttctctgcgtagccctggctgtcctggaactcacttt 382
Query: 183 gtagaccaggctggcctcaaactcagaaattctcctgcttctgcctcctgagtgctagaa 242
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 383 gtagaccaggctggcctcaaactcagaaattcgcctgcttctgcctcctgagtactagaa 442
Query: 243 ttaaaggtgtgagccaccacgccaggctactagtctatcatcttatatccacttaagaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttaaaggtgtgagccaccacgccaggctactagtctatcatcttatatccacttaagaat 502
Query: 303 cttgtttttatgtagcatatataatactttactacttgaaatttc-catagggaaaaatt 361
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 503 cttgtttttatgtagcatatataatactttactacttgaaattttgcatagggaaaaatt 562
Query: 362 atacagcacaataaaactgttccaatctgcagggcctctctccaagacataccacccaaa 421
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 563 atacagcacaataaaactgttccaatctgcagggcctctcttcaagacataccacccaaa 622
Query: 422 acagttatggcatacatctctactgttaatgcttattatttaccaattcttttacgttat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 623 acagttatggcatacatctctactgttaatgcttattatttaccaattcttttaccttat 682
Query: 482 atgtactaatatacaaaacggcactgtgctatgtaatgatgttagacatttatactctgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atgtactaatatacaaaacggcactgtgctatgtaatgatgttagacatttatactctgt 742
Query: 542 tttaattctctcttcaatgagtacataatattctatcggg 581
||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tttaattctctcttcaatgagtacataatattctatcggg 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_e17.g1 MSMg01no095_e17.g1 CHROMAT_FILE:
MSMg01no095_e17.g1 PHD_FILE: MSMg01no095_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:16 2005
(528 letters)
>mm_chr9_79708298_79709225
Length = 928
Score = 938 bits (485), Expect = 0.0
Identities = 518/529 (97%), Gaps = 2/529 (0%)
Strand = Plus / Minus
Query: 1 agtacttacgttcaactagttagccctcctgttaaaacatgcatcaatgactaagtttgt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agtactttcgttcaactagttagccctcctgttaaaacatgcatcaatgactaagtttgt 669
Query: 61 agttttgaactcatggcttacggtggtgctggagaaaactgttgtactgttatggactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agttttgaactcatggcttacggtggtgctggagaaaactgttgtactgttatggactga 609
Query: 121 aatctgtgcccaactagctgttaaagtcacactggtttatcttttagccttctggtaaag 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aatctgtgcccaaccagctgttaaagtcacactggtttatcttttagccttctggtaaag 549
Query: 181 cagctccaagcctagaagggaacacacatacacagcaaatgtcagctgtatcacag-agt 239
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | |
Sbjct: 548 cagctccaagcctagaagggaacacatatactcagcaaatgtcagctgtatcacagta-t 490
Query: 240 gtcaacagaaaaagcccccagaggtgcaagcattgtatgatgggaacccaagacgatgcc 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtcaacagaaaaagccctcagaggtgcaagcattgtatgatgggaacccaagacgatgcc 430
Query: 300 atctacatctgtggttttcttgagagtgtcaataaaatgttgaggaaaaccaccaaaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 429 atctacatctgtggttttcttgagagtgtcaataaaatgttgaggaaaatcaccaaaaga 370
Query: 360 ctaccaagttgccttgtctggtgactgtctgggtgttcaaagcgtagaatttgatgggaa 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 369 ctaccaagttgccttgtctggtgactgtctgggtgttcaaagggtagaatttgatgggaa 310
Query: 420 gtacttagtttaaaagctcagcacagcacagtgtgagttctagccgtgtgcttctgtatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtacttagtttaaaagctcagcacagcacagtgtgagttctagccgtgtgcttctgtatg 250
Query: 480 aagcagattgcttaggagacacgaaatcagtaagaatggctattcatta 528
|||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 249 aagcagattgcttaggagacactaaatcagtaagaatgactattcatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
