NNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCNNCCCCCCCT
AACCCGAATTGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCCCTCTGTCCTTTAGCTTCTACGTGTGGTACTTT
GTTTCTTCTCATGTTACTCTGCTCTTTGAGGCAAGTTCTATATGAAGCTC
CTGCTGCCCCTGTCTGAAGAGGCCAGGCATTCAAGAGTCGCACTCAGAGG
CTCTCACTTTGCTTGGGCATCTTTTGTGTTGAAAGCAATGTTAATCATCT
CAAAGGACCTCTGCTGAGATTGCGTGTCAGAACCCTTAATTTTATTGCAG
CTCTGTGCGTAGGCAGGTTTATGTGGTCTGGATGTGTTACTTGCTAATGT
GTATGCTATAAGTGCCCAGGAATGCCCTTTGGAGAAGAGGAAAGTATTGA
TCACCTAAATTAAAATATGCATGGTGTACGCTGGTGAAGTTCTCTAACCA
GCATGCGCTGTGTGGTAGCGCCTTGGGCATCATCAGTACTACCTGCCAAA
GAAAGGAGGGAGGACAGCTTCTGTTCGGCAGGGTAAGGTTGTTTCTAAGG
GTGTTCTATGCAGAGAATATATACTGTCTGGGCTCTTTAATAGCCACAGT
GTATAGAACAACGCAAGAATAACCTCTTAATCAGTTCTAATTCTGTCCCC
TTGATAGCCTAATTCTGCTGCCCTTAATCAGCCAGTTTTCTCATTTATCT
TCAGCTGAGGTCAAGCCCCCT

NNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTNCCCCACCACAC
TTTTNNACTATGACATGGGTGGCCTGGAGGCCGCCTTCAGACAAGGTTAG
GTGAACTATATTTGCCCCGCGGAATTCTCTAGCCCAGCTGGGGAGGGCAG
TGGTAGGGGCTCAGTCTGTAATCTGCTGCTTTGACCCCAACAGCTGCATT
TCTGCTTCATTCTGTGAGAGCATGCAACAAGCCATCTTAAATGCAAGGTG
GCACACAGCAAGCAGGTAATAGTTTTCCTGATTGAAGTCACCTGTTTTCC
CTGACAGCCAGAGTTAGGTGAGATAAAAATCTGGAAAATGCATACGTTCC
CCCAGTCCCTTTCTGAAATGTTGCTTTTCGTTGTTGTTCACAGAAGCTAA
ATGTACCTCTTCTGTGTTAGCTAAAGTCCCAGGAAGCGAACGTGAGATTC
CCCAAGGAGAGGCTTGCTCAGGGGCTGTGCTGCTTGCTTCCTTTCCGCCC
TTGGTCCTTAGAAAGGAAGCACTGACCGTCTCCCAGGGTTCAGCCCATCC
CTCTGCCTCCATCTCTCCTTTCCTCTGACAACAGGTCGGGGGAATTCAGA
CTCACCCACAAAAGATTAAAAGTTCCAAATCACTACAACTTTGTGCATGT
AGACTTGGAAAACATTCAAATACTCAGACCTGGAGTTGTTTCTTCTGGAT
TACTGTTGTGCAGACCGATGAAACTAGAATAGCTACG

Query= MSMg01no098_o09.g1 MSMg01no098_o09.g1 CHROMAT_FILE:
MSMg01no098_o09.g1 PHD_FILE: MSMg01no098_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:09 2005
         (544 letters)



>mm_chr9_13335183_13336126
          Length = 944

 Score = 1021 bits (528), Expect = 0.0
 Identities = 540/544 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggaattctctagcccagctggggagggcagtggtaggggctcagtctgtaatctgctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggaattctctagcccagctggggagggcagtggtaggggctcagtctgtaatctgctgct 685

                                                                       
Query: 61  ttgaccccaacagctgcatttctgcttcattctgtgagagcatgcaacaagccatcttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgaccccaacagctgcatttctgcttcattctgtgagagcatgcaacaagccatcttaa 625

                                                                       
Query: 121 atgcaaggtggcacacagcaagcaggtaatagttttcctgattgaagtcacctgttttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgcaaggtggcacacagcaagcaggtaatagttttcctgattgaagtcacctgttttcc 565

                                                                       
Query: 181 ctgacagccagagttaggtgagataaaaatctggaaaatgcatacgttcccccagtccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 ctgacagccagagttaggtgagataaaaatctggaaaatgcatacgttcccccagtcgct 505

                                                                       
Query: 241 ttctgaaatgttgcttttcgttgttgttcacagaagctaaatgtacctcttctgtgttag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctgaaatgttgcttttcgttgttgttcacagaagctaaatgtacctcttctgtgttag 445

                                                                       
Query: 301 ctaaagtcccaggaagcgaacgtgagattccccaaggagaggcttgctcaggggctgtgc 360
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 ctaaagtcctaggaagcgaacgtgagattccccagggagaggcttgctcaggggctgtgc 385

                                                                       
Query: 361 tgcttgcttcctttccgcccttggtccttagaaaggaagcactgaccgtctcccagggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 tgcttgcttcctttccgcccttggtccttagaaaggaagcactgaccgtttcccagggtt 325

                                                                       
Query: 421 cagcccatccctctgcctccatctctcctttcctctgacaacaggtcgggggaattcaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagcccatccctctgcctccatctctcctttcctctgacaacaggtcgggggaattcaga 265

                                                                       
Query: 481 ctcacccacaaaagattaaaagttccaaatcactacaactttgtgcatgtagacttggaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcacccacaaaagattaaaagttccaaatcactacaactttgtgcatgtagacttggaa 205

               
Query: 541 aaca 544
           ||||
Sbjct: 204 aaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)