Query= MSMg01no102_o13.b1 MSMg01no102_o13.b1 CHROMAT_FILE:
MSMg01no102_o13.b1 PHD_FILE: MSMg01no102_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:38 2005
(181 letters)
>mm_chr9_56499505_56500085
Length = 581
Score = 350 bits (181), Expect = e-101
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 tggaagtcagttgaagggtgagaaaaggacagacagaagttgtctagggagaggccaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaagtcagttgaagggtgagaaaaggacagacagaagttgtctagggagaggccaggt 260
Query: 61 caaagatgaggtagtctcaggatgaggagacagtaaaagtagtctgaagggttgtcatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagatgaggtagtctcaggatgaggagacagtaaaagtagtctgaagggttgtcatag 320
Query: 121 gagagaggccatgtgtggacggcatagaggatgggatgagaatgagggaggggaggtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagaggccatgtgtggacggcatagaggatgggatgagaatgagggaggggaggtgat 380
Query: 181 g 181
|
Sbjct: 381 g 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_o13.g1 MSMg01no102_o13.g1 CHROMAT_FILE:
MSMg01no102_o13.g1 PHD_FILE: MSMg01no102_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:39 2005
(351 letters)
>mm_chr9_56673029_56673775
Length = 747
Score = 578 bits (299), Expect = e-169
Identities = 335/353 (94%), Gaps = 13/353 (3%)
Strand = Plus / Minus
Query: 1 atgcagcttcctgccatcctctgttctgttcccggctcctctcccctcctcctcaggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgcagcttcctgccatcctctgttctgttcccggctcctctcccctcctcctcaggctt 378
Query: 61 cccctttgggcagcagggatttggtccccatggctctagggtgtgtgtgcgtgcatgcgt 120
|||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 377 cccctttgggcagcggggatttggtccccatggctctagggtgtgtatgcg----tgcgt 322
Query: 121 gcgcgcggtgcacagcctgggacctcgggcagcaggctggtcctttctaagtctccactg 180
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 gtgcgcggtgcacagcctgggacctcgggcagcaggctggtcctttctaagcctccactg 262
Query: 181 gcttttcagagcagatgggtgttggactagtcgtattctgtcgctttgactgctttacgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttttcagagcagatgggtgttggactagtcgtattctgtcgctttgactgctttacgg 202
Query: 241 atttttt--gtttttaagatagggttttacacatcagggtgcctttgaactacgtgtgca 298
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 attttttggg---ttaagatagggttttacacatcagggtgcctttgaactacgtgtgta 145
Query: 299 gccaacaatgaatgaccttgtgtcatctcctgaatgtttgccttcacttacca 351
|||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gccaac----aatgaccttgtgtcatctcctgaatgtttgccttcacttacca 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 747
Length adjustment: 9
Effective length of query: 342
Effective length of database: 738
Effective search space: 252396
Effective search space used: 252396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
