Query= MSMg01no108_m14.b1 MSMg01no108_m14.b1 CHROMAT_FILE:
MSMg01no108_m14.b1 PHD_FILE: MSMg01no108_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:45 2005
(668 letters)
>mm_chr9_76652667_76653733
Length = 1067
Score = 1261 bits (652), Expect = 0.0
Identities = 661/664 (99%), Gaps = 1/664 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttatattgacatacaaacacttttattttatacccttttcaattcacagctt 64
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaatacttttatattga-atacaaacacttttattttatacccttttcaattcacagctt 686
Query: 65 tcaattcaatatctattaagaattttgttgcattttataaaagtgtataaaccgtgatct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaattcaatatctattaagaattttgttgcattttataaaagtgtataaaccgtgatct 626
Query: 125 ctgctctttgaatatccctgtgcttggaattttaattccattaccctttaacctgcaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgctctttgaatatccctgtgcttggaattttaattccattaccctttaacctgcaaga 566
Query: 185 ctagaatgacttctgacttttctcaatataattgtcattcttgatcatgagtttctcatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctagaatgacttctgacttttctcaatataattgtcattcttgatcatgagtttctcatt 506
Query: 245 tctacaccaatcagctagtaaccagccacaccctcttgagtaagcccattagtcttttcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctacaccaatcagctagtaaccagccacaccctcttgagtaagcccattagtcttttcc 446
Query: 305 catgggatccaacactgcttgttgatacatgaatctcagtccggcattctgattcacatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catgggatccaacactgcttgttgatacatgaatctcagtccggcattctgattcacatt 386
Query: 365 gcctgagtatatctgctggccttcactgtactgtcagctctttgggtgcagagttcaatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcctgagtatatctgctggccttcactgtactgtcagctctttgggtgcagagttcaatg 326
Query: 425 catgacacattgtagacaatcactgtatgcttattgaatgcctaagtcatttgttcacgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgacacattgtagacaatcactgtatgcttattgaatgcctaagtcatttgttcacgc 266
Query: 485 tactatcagagcaatgcatactagcagagttgtgccttgctgattttagtattccatcct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tactatcagagcaatgcatactagcagagttgtgccttgctgattttagtattccatcct 206
Query: 545 atggagccactatgagtgaccatgactaccctaaatgccatgttccaacatggaagcagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atggagccactatgagtgaccatgactaccctaaatgccatgttccaacatggaagcagt 146
Query: 605 tttattaagttttagagttttacagaagaaaaatatcatatgtaaaggaagcttataata 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 145 tttattaagttttagagttttacagaagaaaaatatcatatgtaaaggaagcttaaaata 86
Query: 665 tctt 668
||||
Sbjct: 85 tctt 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1067
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1057
Effective search space: 695506
Effective search space used: 695506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_m14.g1 MSMg01no108_m14.g1 CHROMAT_FILE:
MSMg01no108_m14.g1 PHD_FILE: MSMg01no108_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:45 2005
(626 letters)
>mm_chr9_76501034_76502059
Length = 1026
Score = 1181 bits (611), Expect = 0.0
Identities = 620/623 (99%)
Strand = Plus / Plus
Query: 1 cagattctcactgcaacctattatgttactctgaacttcagtcatcccaggtcaggttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagattctcactgcaacctattatgttactctgaacttcagtcatcccaggtcaggttgg 260
Query: 61 ggcatgttttctaaatcctcgatttgcagtcctgatgtttccttcccaccaacaatatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcatgttttctaaatcctcgatttgcagtcctgatgtttccttcccaccaacaatatag 320
Query: 121 attgactcttgttttcccattggcaataatgccaagacaaaacaggtagagtgggtatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgactcttgttttcccattggcaataatgccaagacaaaacaggtagagtgggtatga 380
Query: 181 ctatttacatgaagactcattgaaataacttatccagctgtagaaatccttataatgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatttacatgaagactcattgaaataacttatccagctgtagaaatccttataatgatt 440
Query: 241 tcagtgttctccaaacacccacacttaagtaatgcattattgagcttacagaaatcagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtgttctccaaacacccacacttaagtaatgcattattgagcttacagaaatcagtt 500
Query: 301 taattgttaattatcaagttggttttccttaaccattcttgtgtttataaagcacatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taattgttaattatcaagttggttttccttaaccattcttgtgtttataaagcacatgct 560
Query: 361 ctgatatttggaatttaatttatgaagatctagcaaaaatataaaactcttccctatctt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgatatttggaatttaatttatgaagatctagcaaaaatataaaactcttccctatctc 620
Query: 421 attttgcttcaatagagacaatagtaatggtagtcgttttcaactctaacgtctcaactc 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 attttgcttcaatagagacaatagtaatggtagtcgttttcaactctaacatctcaactc 680
Query: 481 ataaaaacattaggatgaggaatgaggtaatgtcaaaaaagaagtaagaaaaagagtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataaaaacattaggatgaggaatgaggtaatgtcaaaaaagaagtaagaaaaagagtggt 740
Query: 541 gtggtgtgacttactaagttagtttacactaaatatacctgtatgcatctatgttcattg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741 gtggtgtgacttactaagttagtttacactaaatatacctgtatgcatctatgtacattg 800
Query: 601 cagcactactcacaaaagccaga 623
|||||||||||||||||||||||
Sbjct: 801 cagcactactcacaaaagccaga 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
