CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAACTGAATAAATTGTAAGAATTGCTTTACATTGAATAAACTTCAAT
GTCATCTACCATATTTCTAACAAAATAAAATAGAAATACCATCTATCTCC
CCAGATGCTGAAAAAGTTAACACTCATTTCTGACTAAAAGATGATAATTA
TGAGAAAATATTGCATATAATATGTATTATAGAAGACTATAGCGGGTTTT
ATATGGTTTTGTTATTTCTCTTTTGACCTTACTAGATGTTGTGTAGTTTA
ACTTGCTATCATTTTTAAGATGTTTTAACTTGTGTTTCAGTGCAACCGAC
TGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAG
TATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGGTA
AGAAAGTGATTTCCTAGACGAGGGAAGTTAATATAGGGTTTCTTCTACCT
TTTCTTTTTAATCTTGATAATAAAACGGGAAACTTCATGCTGGGAAATAA
ATGATACTAGCTAACAGTAGTGTGTATTTCTTTTAAGTAAGACACAAATC
ACACCTTAAGTTTTGTTCTTTCCCTAATGCTTTTATATTTTGGAGCATTG
TGCATGTATATGATATGTGGGCGGCTGGCGGTCNNCCTTNTCTNCTCTTT
TTCTTTCTCTTCCCCCTTTTCCTCTCCCCT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTTAACTGGCCACATTTAAAGACC
AGCTAGACTCTGCTTTAAACATATTTTCTTTTACTGTTAGTCAGTCTCCA
TGTTGACTAGCAAGTAAGAGCAGAGGAAGCTCATCCATCCAGTGCATGTA
CCCAGCACTGAAGACATGGCTGCATGTCATACCAGGGTGTGTCTGCATGT
CCAGGCATCAGCTAAGGAGGCTTTGAGTTCAGGGGAAGCAAGGGAAGTTC
TACCCCTGGGTAGATAGTGGATGGAAACTCAGCTTGTATAGTAGAAACTG
GACTTCCCTGAGGAAGAAGTGACCAGGGCATGTGCACACTCAGTGTGAGT
GCAGCCACTGCCCTTGCTCTTGGTAGGTCTGACCTGGCTATAGAGATTGT
TGCTAAGGTAACGGTCACTGAGGGGCAGAATGCACACACTCAGTGAACTG
AGCAACAGTCGTCGAGGCATCTTGTCTTGTCAATTTATGTTGAGGGTTAA
TTTAGAGTGAATAGGTTGAAAGAGAGTGTTGTTTCCCTGCCAACCACCAA
GTAATAACTGGGTTAGCATGATTTTGGTCTGAGTCATTGTGGTAGATATG
ATCACAAAGCACTGATAGGCAGCTTGAGTGTGGGGNTGGGTGGGAAGGTC
CCTTACCCCCACAAGGCCCCTGGATGCTTCCTCTGTAAACTCCAN

Query= MSMg01no114_c13.b1 MSMg01no114_c13.b1 CHROMAT_FILE:
MSMg01no114_c13.b1 PHD_FILE: MSMg01no114_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:47 2005
         (522 letters)



>mm_chr9_59259915_59260836
          Length = 922

 Score =  982 bits (508), Expect = 0.0
 Identities = 511/512 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaactgaataaattgtaagaattgctttacattgaataaacttcaatgtcatcta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gaattcaactgaataaattgtaagaattgctttacattgaataaacttcaatgtcatcta 657

                                                                       
Query: 65  ccatatttctaacaaaataaaatagaaataccatctatctccccagatgctgaaaaagtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 656 ccatatttctaacaaaataaaatagaaataccatctatctccccagatgctgataaagtt 597

                                                                       
Query: 125 aacactcatttctgactaaaagatgataattatgagaaaatattgcatataatatgtatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aacactcatttctgactaaaagatgataattatgagaaaatattgcatataatatgtatt 537

                                                                       
Query: 185 atagaagactatagcgggttttatatggttttgttatttctcttttgaccttactagatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atagaagactatagcgggttttatatggttttgttatttctcttttgaccttactagatg 477

                                                                       
Query: 245 ttgtgtagtttaacttgctatcatttttaagatgttttaacttgtgtttcagtgcaaccg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgtgtagtttaacttgctatcatttttaagatgttttaacttgtgtttcagtgcaaccg 417

                                                                       
Query: 305 actgttaaagtggtgtcctgccccagattgccaccatgttgttaaagtccagtatcctga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 actgttaaagtggtgtcctgccccagattgccaccatgttgttaaagtccagtatcctga 357

                                                                       
Query: 365 tgcaaaaccagttcgctgcaaatgtggccgccagttttggtaagaaagtgatttcctaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgcaaaaccagttcgctgcaaatgtggccgccagttttggtaagaaagtgatttcctaga 297

                                                                       
Query: 425 cgagggaagttaatatagggtttcttctaccttttctttttaatcttgataataaaacgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cgagggaagttaatatagggtttcttctaccttttctttttaatcttgataataaaacgg 237

                                           
Query: 485 gaaacttcatgctgggaaataaatgatactag 516
           ||||||||||||||||||||||||||||||||
Sbjct: 236 gaaacttcatgctgggaaataaatgatactag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space:   466944
Effective search space used:   466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no114_c13.g1 MSMg01no114_c13.g1 CHROMAT_FILE:
MSMg01no114_c13.g1 PHD_FILE: MSMg01no114_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:47 2005
         (595 letters)



>mm_chr9_59207740_59208734
          Length = 995

 Score = 1120 bits (579), Expect = 0.0
 Identities = 591/595 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttaactggccacatttaaagaccagctagactctgctttaaacatattttcttttact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttaactggccacatttaaagaccagctagactctgctttaaacatattttcttttact 260

                                                                       
Query: 61  gttagtcagtctccatgttgactagcaagtaagagcagaggaagctcatccatccagtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttagtcagtctccatgttgactagcaagtaagagcagaggaagctcatccatccagtgc 320

                                                                       
Query: 121 atgtacccagcactgaagacatggctgcatgtcataccagggtgtgtctgcatgtccagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtacccagcactgaagacatggctgcatgtcataccagggtgtgtctgcatgtccagg 380

                                                                       
Query: 181 catcagctaaggaggctttgagttcaggggaagcaagggaagttctacccctgggtagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcagctaaggaggctttgagttcaggggaagcaagggaagttctacccctgggtagat 440

                                                                       
Query: 241 agtggatggaaactcagcttgtatagtagaaactggacttccctgaggaagaagtgacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtggatggaaactcagcttgtatagtagaaactggacttccctgaggaagaagtgacca 500

                                                                       
Query: 301 gggcatgtgcacactcagtgtgagtgcagccactgcccttgctcttggtaggtctgacct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggcatgtgcacactcagtgtgagtgcagccactgcccttgctcttggtaggtctgacct 560

                                                                       
Query: 361 ggctatagagattgttgctaaggtaacggtcactgaggggcagaatgcacacactcagtg 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 ggctatagagattgttgctaaggtaacggtcactgagaggcagaatgcacacactcagtg 620

                                                                       
Query: 421 aactgagcaacagtcgtcgaggcatcttgtcttgtcaatttatgttgagggttaatttag 480
           |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 621 aactgagcaacagttgtcgaggcatcttgtcttgtcagtttatgttgagggtttatttag 680

                                                                       
Query: 481 agtgaataggttgaaagagagtgttgtttccctgccaaccaccaagtaataactgggtta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtgaataggttgaaagagagtgttgtttccctgccaaccaccaagtaataactgggtta 740

                                                                  
Query: 541 gcatgattttggtctgagtcattgtggtagatatgatcacaaagcactgataggc 595
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcatgattttggtctgagtcattgtggtagatatgatcacaaagcactgataggc 795


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)