Query= MSMg01no115_i10.b1 MSMg01no115_i10.b1 CHROMAT_FILE:
MSMg01no115_i10.b1 PHD_FILE: MSMg01no115_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:29 2005
(476 letters)
>mm_chr9_22520085_22520960
Length = 876
Score = 851 bits (440), Expect = 0.0
Identities = 464/476 (97%), Gaps = 8/476 (1%)
Strand = Plus / Minus
Query: 5 gaattctctcctacattttcctacatgcaacgttttccagtctcctcgtgccaatgtttt 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 676 gaattctctcctacattttcctacatgcaatgttttccagtctcctcgtgccaatgtttt 617
Query: 65 tctctacaagctggaccatataaacctctgggtttattttagtctaagtttgataaatgt 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tctctacaagccggaccatataaacctctgggtttattttagtctaagtttgataaatgt 557
Query: 125 tacctaaagcaagtcttcctttttgttttaacaccaaaaattagatccacatttatttga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tacctaaagcaagtcttcctttttgttttaacaccaaaaattagatccacatttatttga 497
Query: 185 aagaattcaaagtccttgtgcttgtattcttacaagacttccctccccagcaggccgcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aagaattcaaagtccttgtgcttgtattcttacaagacttccctccccagcaggccgcca 437
Query: 245 acggaaggtcaagcagggtctcagaagtaggcggcaaaagtccctggcttagcgattcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acggaaggtcaagcagggtctcagaagtaggcggcaaaagtccctggcttagcgattcag 377
Query: 305 tgtggcctgcttgggtgctccatgagaaggcaatgtcaactgagcttgcttgggccccaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgtggcctgcttgggtgctccatgagaaggcaatgtcaactgagcttgcttgggccccaa 317
Query: 365 aagtg----cccccttactcctcattccttccagcctctctctgccagtgccttcagttt 420
||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 316 aagtgtttt----cttactcctcattccttccagcctctctctgccagtgccttcggttt 261
Query: 421 ctgggccttttgaggaaggctgacctggcatacaagttcctatccatttcagcaca 476
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 260 ctgggccttttgaggaaggctgacctggcagacaagttcctatccatttcagcaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_i10.g1 MSMg01no115_i10.g1 CHROMAT_FILE:
MSMg01no115_i10.g1 PHD_FILE: MSMg01no115_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:29 2005
(447 letters)
>mm_chr9_22413739_22414586
Length = 848
Score = 801 bits (414), Expect = 0.0
Identities = 438/446 (98%), Gaps = 1/446 (0%)
Strand = Plus / Plus
Query: 1 atggttttaagtgagagtgtaagcagaaagt-accagcaaaggggtagaactgtctgatg 59
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 atggttttaagtgagagtgtaagcagaaagttaccagcaaaggggtagaactgtctgatg 260
Query: 60 gcgctggagactcaaagcgtgcagatgagcattaggagacattgaggacagccttggaag 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgctggaggctcaaagcgtgcagatgagcattaggagacattgaggacagccttggaag 320
Query: 120 aaaatcgagggtgtgaagaagcacagaaacccagaggcataggaaccagagaagcagagc 179
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aaaatcgagggtgtgaagaagcacagaagcccagaggcataggaaccagagaagcagagc 380
Query: 180 gcagcctgacagtctgccctgtctgcggaggctgcgcccacgtgtctggtgggcatcacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagcctgacagtctgccctgtctgcggaggctgcgcccacgtgtctggtgggcatcacc 440
Query: 240 cgttactctcttctctgcgctcactgaggaaagcagctgccctcttgcactgtacatgac 299
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 cgttactctcttctctgcgctcactgaggaaagcagctgccctcctgcactgtacatgac 500
Query: 300 tggcttcatgctcgggcattctcaggcaaggacctaggcgccccttctgatgttttcatg 359
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 501 tggcttcatgctcgggcattctcaggcaaggacctaggcgtcttttctgatgttttcatg 560
Query: 360 gtacttttctcagattccagtgataattatgtgctgtcactcactctgtgtaccgtcttc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacttttctcagattccagtgataattatgtgctgtcactcactctgtgtaccgtcttc 620
Query: 420 cttctgtccattttctgtccactgat 445
||||||||||||||||||||||||||
Sbjct: 621 cttctgtccattttctgtccactgat 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space: 366206
Effective search space used: 366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
