CATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAAGAAACTGCTTCCAATGAGCAGCAGGGATCCTCTTTTTGGGAA
CAAGAAATGGATAATTTATGATTCTATCCAAGAAGTTTCTTTATGTGTGA
TCTGTCATATTTTTCTTGAGGATCAACTAAGCAGTAGGCATAGTACTAGG
TACAAGTTGACCACCTCTTAGCCAAAATGCTTTGGACCAAAGGTATTTTG
GAAGTCAAATTTTTCAGATGTTGGAATGTTTGCAAAAACGTAATGCCATG
GTGGGACAGAAATCTAAGGACAAAATTTATATTTCATCTACGCCTTACCC
ACACAGCCTACAGACAACTACATATGAAACTTTCAGCATGCCTCTTCTTT
GACTTACATGTGAGGTTAGGTGTGGAATTTTTCATTGTGAAAAATCACAT
CAGTATTCAAAAACCTTCAGATCCAGGGGCATTTAAGGTGCTACAGTTTC
AGATTAGGCAGGTTCAAACTAAATTAATTAAATAGTATGTCAAGAGTTCA
GAATGGAGGAATTGAGCAAAACCCACTGCTCAGGAAACACAGACATTAGC
TACATACTAGTAGTCACATATCAATGAAAAACACAGACAAAATGCCCTGT
TTGATACTGGGAGCTCACAGAAATCAGGGCCTGCCTGTTTATTCTCATCT
GTCTAATAAGGTACATACTGGGCACTGAA

NCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGTACAATGTTGAATAGGTAGGGA
GAAAGTCGGCAGCCTTGTCTAGTCCCTGATTTTAATGGGATTGGTCCAGC
TTCTCACCATTTACTTTGATGTTGGCTACTATTTTGCTGTAGATTGCTTT
TATTATGTTTCGGTATGAGCGTTGAATTCCTGATCTTTCCAAGACTTTTA
TCATGAATGGGTGTTGGATTTTGTGGAATGCTTTCTCCCCGTCTAAGGAG
ATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTATGTT
GATGGATTTTTGTATATTAAACCATCTCTGCATCCCTGGAATAAAACCTA
CTTGGTCAGGATGGATGATTGTTTTAATGTGTTCTTGGATCCGGTAAGCG
AGAATTTTATTGAGTATTTTTGCATGGATATTCATAAGGGAAATTGGCTT
GAAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTAAGGTATCAGAGTAA
TCTGTGTCTTCATAGAATGAGTTAAGCATTAGTACCTCCTACTTCTATTT
TCGGTAATTACTTACGTCCAATTGTAAATAGTTTTTTTGATCGTCTGCAT
CACCTTCTGAACTAAACCCATCTGCTCCCGGTCTTCTTCTGGCTTTTTAA
AATATCATTCACCGCTTTCACTTCCTCTC

Query= MSMg01no117_m20.b1 MSMg01no117_m20.b1 CHROMAT_FILE:
MSMg01no117_m20.b1 PHD_FILE: MSMg01no117_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:28 2005
         (555 letters)



>mm_chr9_30041199_30042153
          Length = 955

 Score = 1050 bits (543), Expect = 0.0
 Identities = 552/555 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgagcagcagggatcctctttttgggaacaagaaatggataatttatgattctatccaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagcagcagggatcctctttttgggaacaagaaatggataatttatgattctatccaag 260

                                                                       
Query: 61  aagtttctttatgtgtgatctgtcatatttttcttgaggatcaactaagcagtaggcata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtttctttatgtgtgatctgtcatatttttcttgaggatcaactaagcagtaggcata 320

                                                                       
Query: 121 gtactaggtacaagttgaccacctcttagccaaaatgctttggaccaaaggtattttgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtactaggtacaagttgaccacctcttagccaaaatgctttggaccaaaggtattttgga 380

                                                                       
Query: 181 agtcaaatttttcagatgttggaatgtttgcaaaaacgtaatgccatggtgggacagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcaaatttttcagatgttggaatgtttgcaaaaacgtaatgccatggtgggacagaaa 440

                                                                       
Query: 241 tctaaggacaaaatttatatttcatctacgccttacccacacagcctacagacaactaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctaaggacaaaatttatatttcatctacgccttacccacacagcctacagacaactaca 500

                                                                       
Query: 301 tatgaaactttcagcatgcctcttctttgacttacatgtgaggttaggtgtggaattttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgaaactttcagcatgcctcttctttgacttacatgtgaggttaggtgtggaattttt 560

                                                                       
Query: 361 cattgtgaaaaatcacatcagtattcaaaaaccttcagatccaggggcatttaaggtgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgtgaaaaatcacatcagtattcaaaaaccttcagatccaggggcatttaaggtgct 620

                                                                       
Query: 421 acagtttcagattaggcaggttcaaactaaattaattaaatagtatgtcaagagttcaga 480
           | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagtttcaggttaggcaggttcaaactaaattaattaaatagtatgtcaagagttcaga 680

                                                                       
Query: 481 atggaggaattgagcaaaacccactgctcaggaaacacagacattagctacatactagta 540
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atggaagaattgagcaaaacccactgctcaggaaacacagacattagctacatactagta 740

                          
Query: 541 gtcacatatcaatga 555
           |||||||||||||||
Sbjct: 741 gtcacatatcaatga 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)