Query= MSMg01no119_a16.b1 MSMg01no119_a16.b1 CHROMAT_FILE:
MSMg01no119_a16.b1 PHD_FILE: MSMg01no119_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:04 2005
(651 letters)
>mm_chr9_28255528_28256579
Length = 1052
Score = 1226 bits (634), Expect = 0.0
Identities = 646/650 (99%), Gaps = 1/650 (0%)
Strand = Plus / Minus
Query: 3 agggcccaaaaattcagaggaagataaactacaaaagcaacatttcacctacaaaggcag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 agggcccaaaaattcagaggaagataaactacaaaagcaacatttcacctacaaaggcag 793
Query: 63 agttaaccccttcttttctaaagaccagagaaacaagaacttattcagattgctaacagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 agttaaccccttcttttctaaagaccagagaaacaagaacttattcagattgctaacagg 733
Query: 123 gcatttggggtatttgcctaaaag-aaaaaaaaaaggcgattttgaataggaacagagaa 181
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 732 gcatttggggtgtttgcctaaaagaaaaaaaaaaaggcgattttgaataggaacagagaa 673
Query: 182 tgggcatgtcaaatactgagagaaatgtagagggaagaataactgtaaatcacattggta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgggcatgtcaaatactgagagaaatgtagagggaagaataactgtaaatcacattggta 613
Query: 242 tatggtatataaaaggagaggacctttttgggtttcaaaataagtattcatttgattccc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tatggtatataaaaggagaggacctttttgggtttcaaaataagtattcatttgattccc 553
Query: 302 agtgatacctcatagggctccttcaggcagctctttatttactagctggttgtaatacag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 agtgatacctcatagggctccttcaggcagctctttatttactagctggttgtaatacag 493
Query: 362 aggcagggcatgagttagaagcaggaaggatgcacttgacttggattcagttgaggtgtt 421
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 492 aggcagggcatgagttagaagcaggaaggatgcacttgacttgaattcagttgaggtgtt 433
Query: 422 ggcattcttaaaaaaatcaaacaaagtctttcccagagctgatgtcatgcacttctgact 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggcattcttaaaaaaatcaaacaaagtctttcccagagctgatgtcatgcacttctgact 373
Query: 482 ttctcaggttctgtaaaggtctctttgttcactattcctattctctcatatcccatcagc 541
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttctcgggttctgtaaaggtctctttgttcactattcctattctctcatatcccatcagc 313
Query: 542 atttttcccctctgccttcaacgtttccctcccatctggccactcttcttgagattacca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atttttcccctctgccttcaacgtttccctcccatctggccactcttcttgagattacca 253
Query: 602 atcctctcagctcagtacagtggatgagtctgaatctttgggttttagga 651
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atcctctcagctcagtacagtggatgagtctgaatctttgggttttagga 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_a16.g1 MSMg01no119_a16.g1 CHROMAT_FILE:
MSMg01no119_a16.g1 PHD_FILE: MSMg01no119_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:04 2005
(544 letters)
>mm_chr9_28081794_28082732
Length = 939
Score = 1009 bits (522), Expect = 0.0
Identities = 537/544 (98%), Gaps = 5/544 (0%)
Strand = Plus / Plus
Query: 1 ttttacttttaaattgcactttatctgtatggaaggagggttgcgtgttactttgactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttacttttaaattgcactttatctgtatggaaggagggttgcgtgttactttgactat 260
Query: 61 gtggacagcaacatggaggagttactctttccttttactatgtatgccctgggatactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggacagcaacatggaggagttactctttccttttactatgtatgccctgggatactga 320
Query: 121 acttagtaggccttcagatttgacagcaagcacatttaaccactgagtcttcttgctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttagtaggccttcagatttgacagcaagcacatttaaccactgagtcttcttgctcta 380
Query: 181 aatggaattcttttgttttgctgttgttgttttttgttttgttttgtttttaatttattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatggaattcttttgttttgctgttgttgttttttgttttgttttgtttttaatttattt 440
Query: 241 tatatatgtgaatacattgtcactgtcttcagatagaccagaagagggcatcagatccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatatgtgaatacattgtcactgtcttcagatagaccagaagagggcatcagatccca 500
Query: 301 ttacatagagatagttgtgagctaccacgtgattgctgggaattgaactcaggacttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttacatagagatagttgtgagctaccacgtgattgctgggaattgaactcaggacttctg 560
Query: 361 gaagagcagtcagtgctcttaaactgctaaactatctctctacccctctgaatgtcctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagagcagtcagtgctcttaaactgctaaactatctctctacccctctgaatgtcctta 620
Query: 421 cttaagacatttttagggtgcgaattatggaatctaagcttgaaataaatatcttatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 621 cttaagacatttttagggtgcgaattatggaatctaagcttgaaataaata----a-gga 675
Query: 481 gagaaaagcatcaagaaagaaagtttcatgtgtttctaataacccatagtgggcataaca 540
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 676 gagaaaagcaacaagaaagaaagtttcatgtgtttctaataacccaaagtgggcataaca 735
Query: 541 ccag 544
||||
Sbjct: 736 ccag 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 939
Length adjustment: 10
Effective length of query: 534
Effective length of database: 929
Effective search space: 496086
Effective search space used: 496086
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
