Query= MSMg01no119_b13.b1 MSMg01no119_b13.b1 CHROMAT_FILE:
MSMg01no119_b13.b1 PHD_FILE: MSMg01no119_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:08 2005
(546 letters)
>mm_chr9_21489373_21490317
Length = 945
Score = 986 bits (510), Expect = 0.0
Identities = 537/546 (98%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 1 actgaaagattgagcaggcagacaggctgtgcatcaggacattgcttagctggcacatga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 actgaaagattgagcaggcagacaggctgtgcatcaggacactgcttagctggcacatga 260
Query: 61 ggcctgaatcccaccctcagcaccacacagagtgagaaaaggaagacagtggcgctgtgg 120
||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 261 ggcctgaatcccacc-tcagcaccacacagagtgagaaaaggaagaaagtagcgctgtgg 319
Query: 121 aggacaagcatgcacatgatggcacatgccttacccagatgtgggacatttgaggcaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggacaagcatgcacatgatggcacatgccttacccagatgtgggacatttgaggcaggg 379
Query: 181 gatcagatgttcaagacttgcctaagctacatgaagccctgaatcaaaacaaataagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gatcagatgttcaagacttgcctaagctacatgaagccctgaatcaaaacaaataagtaa 439
Query: 241 tcaacagttatatcagtagtaaaagtgataggagatgtgcatacaacacagtgggcctga 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaacagtaatatcagtagtaaaagtgataggagatgtgcatacaacacagtgggcctga 499
Query: 301 gctgtgtgcgctgcagccgcacagctgcactggggctcacgtagtggcccaagtaaaggt 360
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctgtgtgagctgcagccacacagctgcactggggctcacgtagtggcccaagtaaaggt 559
Query: 361 tctgagggttggctgctagccactgtggccacttgatttcactgcactccatactaatca 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 560 tctgagggttggctgctagccactgtggccacttgattccactgcactccatactaatca 619
Query: 421 aggctattaccaacatgtctgacctcaattcagtccctagaggccacagaatagagccag 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 aggctattaccaacatgtctgacctcagttcagtccctagaggccacagaatagagccag 679
Query: 481 tttccatagcttgttctctgacttctattcccactgccacatacgtgtacacacacacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttccatagcttgttctctgacttctattcccactgccacatacgtgtacacacacacaa 739
Query: 541 tcaatc 546
||||||
Sbjct: 740 tcaatc 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 945
Length adjustment: 10
Effective length of query: 536
Effective length of database: 935
Effective search space: 501160
Effective search space used: 501160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_b13.g1 MSMg01no119_b13.g1 CHROMAT_FILE:
MSMg01no119_b13.g1 PHD_FILE: MSMg01no119_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:08 2005
(549 letters)
>mm_chr9_21648789_21649739
Length = 951
Score = 946 bits (489), Expect = 0.0
Identities = 535/551 (97%), Gaps = 2/551 (0%)
Strand = Plus / Minus
Query: 1 gaattcctctgttgttgtaggatgtatttcaggaggtgtggattcagctcaggggcgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gaattcctctgttgttgtaggatgtatttcaggaggtgtggattcagctcaggggcgaag 692
Query: 61 tgtttgtgcagatgctaggcacgggttccatcctcagctggggcaggggccagggaggga 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tgtttgtgcagatgctaggcatgggttccatcctcagctggggcaggggccagggaggga 632
Query: 121 ggtggagagaagataagggaacgagatgcaggaggggaaactgaggctggtagtcaggtt 180
||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||
Sbjct: 631 ggtggagagaagataaggggacgagatgcaggaggagaaactgaagctggtagtcaggtt 572
Query: 181 agagactcagagtcacagactgaactagattggagtcaggctgtgagcagacctgactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 571 agagactcagagtcacagactgaactagattggagtcaggctgtgagcagagctgactgt 512
Query: 241 aggtggttctaggtcagccatacacctggaggcaagaactcctcttccctggcaacggtg 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aggtggttctaggccagccatacacctggaggcaagaactcctcttccctggcaacggtg 452
Query: 301 aac--agtctcaaaaggctctgattgacccagcccaggagccttgcttggagttagtcct 358
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aacagagtctcaaaaggctctgattgacccagcccaggagccttgcttggagttagtcct 392
Query: 359 tggggctggccagtgtcgtcattccaagcttagcctacaggcagagaagttattaggtgt 418
|||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 391 tggggctggccagtgtggccattccaagcttaacctacaagcagagaagttattaggtgt 332
Query: 419 gttctgattggccagagaagagtcccctgtgaggtggggtagcctcccatagcagcggcg 478
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 331 gttctgattggccagagaagagtcccctgtgaggtggggtagcctcccagagcagcggtg 272
Query: 479 aagagctccctacataggagtatttccaggagtttctggagaggccagtcaggcccccaa 538
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 aagagctccctacataggagtatttccaggagtttctggagaggccagccaggcccccaa 212
Query: 539 atgacccctgt 549
|||||||||||
Sbjct: 211 atgacccctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 951
Length adjustment: 10
Effective length of query: 539
Effective length of database: 941
Effective search space: 507199
Effective search space used: 507199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
