Query= MSMg01no124_b08.b1 MSMg01no124_b08.b1 CHROMAT_FILE:
MSMg01no124_b08.b1 PHD_FILE: MSMg01no124_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:42 2005
(419 letters)
>mm_chr9_22920006_22920823
Length = 818
Score = 580 bits (300), Expect = e-170
Identities = 345/360 (95%), Gaps = 1/360 (0%)
Strand = Plus / Minus
Query: 17 gaattcttaagtagaggatgtccctattacatctatcaaaagtgactatcccccagccca 76
||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 359 gaattcttaagcagaggatgt-cttactacatctatcaaaagtgactatcccccagccca 301
Query: 77 ttgacatttcaatttgtactgagtatgagtccactgtgcacttgttagcttgtaaacctt 136
|||| | |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 300 ttgagagttcagtttgtactgagtacgagtccactgtgcacttgttagcttgtgaacctt 241
Query: 137 tgtgactctctggcagaggaagcacattttggagatgaggaagctgagatgcggtgaggt 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgtgactctctggcagaggaagcacattttggagatgaggaagctgagatgcggtgaggt 181
Query: 197 agagcatcatatctgaggtatcatccagcagcgggtggtagctctggggagctcaacagc 256
||| | || ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agaacgtcttatctgaggcatcatccagcagcgggtggtagctctggggagctcaacagc 121
Query: 257 caggtggctctgatgtcagggtgggatctgtttgtgctcccttcctcttccttaaaggtc 316
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caggtggctctgatgtcggggtgggatctgtttgtgctcccttcctcttccttaaaggtc 61
Query: 317 acattgagagacaactcatagatagtgaaggctttggagtcccttgcctcagctataatt 376
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 60 acattgagagacaactcatagatagtaaaggctttggagtcccttgcctcagctataatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_b08.g1 MSMg01no124_b08.g1 CHROMAT_FILE:
MSMg01no124_b08.g1 PHD_FILE: MSMg01no124_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:42 2005
(374 letters)
>mm_chr9_22765358_22766131
Length = 774
Score = 644 bits (333), Expect = 0.0
Identities = 361/375 (96%), Gaps = 10/375 (2%)
Strand = Plus / Plus
Query: 1 ggaaatggatttagagttgaaatccacagcaccctt--aa---cttccatttttcttacc 55
||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 201 ggaaatggatttagagttgaaatccacagca-----ggaagatcttccatttttcttacc 255
Query: 56 taagttttctggctcttgggtagtggaagcagaaaggaatgtgtttaaagtgtaggtatt 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 taagttttctggctcttgggtagtggaagcagaaaggaatgtgtttaaagtgtaggtatc 315
Query: 116 ctggctgctatcactggctgagccaccgaaggtgattgtcatgcttgggggtggagtctc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctggctgctatcactggctgagccaccgaaggtgattgtcatgcttgggggtggagtctc 375
Query: 176 agccacactcactcaggaccttttattggggtggtaacaaaagtgttcctcctgtaaatg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agccacactcactcaggaccttttattggggtggtaacaaaagtgttcctcctgtaaatg 435
Query: 236 atcacagaaaggatgatctgaattaatttgggggaatttcatttcttagctcaaatgtta 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atcacagaaaggatgatctgaattaatttgggggaatttcatttcttagctcaaatgtta 495
Query: 296 acattgcctcccaccagtaaccatattttaggacctgctctgccacctcccctatgttta 355
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 496 acattgcctcccaccagtaaccataaactaggacctgctctgccacctcccctatgttta 555
Query: 356 accaagctaacctaa 370
|||||||||||||||
Sbjct: 556 accaagctaacctaa 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
