Query= MSMg01no124_h19.b1 MSMg01no124_h19.b1 CHROMAT_FILE:
MSMg01no124_h19.b1 PHD_FILE: MSMg01no124_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:39 2005
(617 letters)
>mm_chr9_84349995_84351011
Length = 1017
Score = 1162 bits (601), Expect = 0.0
Identities = 613/617 (99%)
Strand = Plus / Plus
Query: 1 ggtcttcagttcaccttggacaggttaataaactgtattcagatgttcatgaagaatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtcttcagttcaccttggacaggttaataaactgtattcagatgttcatgaagaatgac 260
Query: 61 agcacctaatgacaacagcagcatcagggtaaatgaactctaagattagacaggaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcacctaatgacaacagcagcatcagggtaaatgaactctaagattagacaggaaggga 320
Query: 121 aacacagaggcaagcaagcaagaagtaaagcattttccccttggacttccttttatatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacacagaggcaagcaagcaagaagtaaagcattttccccttggacttccttttatatgg 380
Query: 181 aagttactagaaggccttgctcacactttggatgtgtcttcccacttcagacaaccagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagttactagaaggccttgctcacactttggatgtgtcttcccacttcagacaaccagaa 440
Query: 241 aaagagaattctttatcgaatcacagattcatttagttgatttcagatctagcatgttga 300
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 aaagagaattctttattgaatcacagattcttttagttgatttcagatctagcatgttga 500
Query: 301 caaccaagattagccattagggcatggagctaagaagttgaggtgttatcctatagcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaccaagattagccattagggcatggagctaagaagttgaggtgttatcctatagcagg 560
Query: 361 aagtatactatttggaagaagacaacatcattataaagtggagaaagttcagtatatttt 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattatactatttggaagaagacaacatcattataaagtggagaaagttcagtatatttt 620
Query: 421 cttaattgtaaagatatttgccaaattcttcatctacttgtaatgcaatcagttttgaat 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 cttaattgtaaagatatttgccaaattcttcacctacttgtaatgcaatcagttttgaat 680
Query: 481 aatataaacttgaacatgttattttaaaattactatgcctatacattttaagttttcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatataaacttgaacatgttattttaaaattactatgcctatacattttaagttttcaaa 740
Query: 541 ataattaatgatctctaaactttgtgtcctaacagataacaatggctttaacaagaacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataattaatgatctctaaactttgtgtcctaacagataacaatggctttaacaagaacat 800
Query: 601 aaattttactatttgtg 617
|||||||||||||||||
Sbjct: 801 aaattttactatttgtg 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_h19.g1 MSMg01no124_h19.g1 CHROMAT_FILE:
MSMg01no124_h19.g1 PHD_FILE: MSMg01no124_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:39 2005
(332 letters)
>mm_chr9_84495451_84496181
Length = 731
Score = 586 bits (303), Expect = e-172
Identities = 324/331 (97%), Gaps = 1/331 (0%)
Strand = Plus / Minus
Query: 1 tatgattcacaatatggatgccattaaaaagcagcaatccttacttgttgaatgtataaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 530 tatgattcacaatatggatgccattaaaaagcagaaatccttacttgttgaatgtgtaaa 471
Query: 61 ttcttgaataaaaataaacaaccaaataataagtaaacaagtatattgatcccaaagaat 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttaatgaataaaaataaacaaccaaataataagtaaacaagtatattgatcccaaagaat 411
Query: 121 agcaaattctgattgagaatcagtattcaatcatatccctatgtaatattgtgttctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agcaaattctgattgagaatcagtattcaatcatatccctatgtaatattgtgttctatt 351
Query: 181 tatataacaagtatttggaaactgtcctcatctaagagaaagaataaataatgtacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tatataacaagtatttggaaactgtcctcatctaagagaaagaataaataatgtacaaac 291
Query: 241 catcatatgtacttaaatatgttctctgccaatgactggtcttctaaaagatcattagcc 300
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 290 catcatatgtacttaaatatgttctctgccaatgactggtcctctaaaagataattagcc 231
Query: 301 tgaagaggaatcattttaataaggaaggcag 331
|||||||||||||||||||| ||||||||||
Sbjct: 230 tgaagaggaatcattttaat-aggaaggcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
