Query= MSMg01no124_j03.b1 MSMg01no124_j03.b1 CHROMAT_FILE:
MSMg01no124_j03.b1 PHD_FILE: MSMg01no124_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:51 2005
(336 letters)
>mm_chr9_77122171_77122906
Length = 736
Score = 582 bits (301), Expect = e-170
Identities = 327/341 (95%), Gaps = 10/341 (2%)
Strand = Plus / Minus
Query: 1 agaactaccccaagtgtttaaactgcagaggaggtaaacattttgaatttactgcagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 agaactaccccaagtgtttaaactgcagaggaggtaaacattttgaatttactgcagcta 477
Query: 61 gacctggatttagaatatctattgacgagttcatgctgatgactcagtgactcagaggag 120
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 476 gatatggatttagaatatctattgatgagttcatgctgatgactcagtgactcagaggac 417
Query: 121 gtggatgtttaacaatagaaaagccatttgagaaaaagggaaagtgtggggaaaagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtggatgtttaacaatagaaaagccatttgagaaaaagggaaagtgtggggaaaagatga 357
Query: 181 agacaaagaggaaaataatgtatccagatcactgatgaccacttttaaaagctgttgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agacaaagaggaaaataatgtatccagatcactgatgaccacttttaaaagctgttgagt 297
Query: 241 tctcccagttcttcttcactggagggcagctgtttatgaa-----tttttagaggaggaa 295
|||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 296 tctcccagttcttcttcactggagggcagctgtttatgaaggcag-----agaggaggaa 242
Query: 296 gaaaattcaagttcagggttcccatgattatgtctgttgtg 336
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaattcaagttcagggttcccatgattatgtctgttgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_j03.g1 MSMg01no124_j03.g1 CHROMAT_FILE:
MSMg01no124_j03.g1 PHD_FILE: MSMg01no124_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:51 2005
(332 letters)
>mm_chr9_77020157_77020888
Length = 732
Score = 613 bits (317), Expect = e-180
Identities = 326/329 (99%)
Strand = Plus / Plus
Query: 1 atgaacaagtcttacccatttcattcaaactaagctgtttctgagcagagaaaagaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaacaagtcttacccatttcattcaaactaagctgtttctgagcagagaaaagaggac 260
Query: 61 ccactcatctttgttaatattgagatggttcagctccagaattaggaaagcttcatcaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acactcatctttgttaatattgagatggttcagctccagaattaggaaagcttcatcaga 320
Query: 121 gcttcaaactgaaagcctatgttgtccatttcctcttcctctttgttatgtgccacatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttcaaactgaaagcctatgttgtccatttcctcttcctctttgttatgtgccacatga 380
Query: 181 agcactatccatctggcctcactgtccctcatcctctctgcacctcttcattaaatcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcactatccatctggcctcactgtccctcatcctctctgcacctcttcattaaatcatc 440
Query: 241 acattttccagacaatgtgaagtttcaggatgagccatatcctggaggtagtcaatgaag 300
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 441 acattttccagacaatgtgaagtttcaggatgagccagaccctggaggtagtcaatgaag 500
Query: 301 ataacagttctccagcggcccatttccca 329
|||||||||||||||||||||||||||||
Sbjct: 501 ataacagttctccagcggcccatttccca 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
