Query= MSMg01no124_l17.b1 MSMg01no124_l17.b1 CHROMAT_FILE:
MSMg01no124_l17.b1 PHD_FILE: MSMg01no124_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:13 2005
(333 letters)
>mm_chr9_16923808_16924540
Length = 733
Score = 574 bits (297), Expect = e-168
Identities = 324/337 (96%), Gaps = 8/337 (2%)
Strand = Plus / Minus
Query: 1 attccaaatagctcaagaaagaaggcaatgtctggggcacccatcacttagctgagggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 attccaaatagctcaagaaagaaggcaatgtctggggcacccatcacttagctgagggcg 474
Query: 61 ccgagaaaaaacaagtgtgggaaagcctggcttactcttcctttcttctgaagacaggtg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 473 gtgagaaaaaacaagtgtgggaaagcctgacttactcttcctttcttctgaagacaggtg 414
Query: 121 aaaccacagtgaacagtgaggacaattgacactcagaggtggaggcctctctgggggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aaaccacagtgaacagtgaggacaattgacactcagaggtggaggcctctctgggggact 354
Query: 181 ctagagtcaagagagaatttggcacccactaaaacattggatgcctggaagggactccat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctggagtcaagagagaatttggcacccactaaaacattggatgcctggaagggactccat 294
Query: 241 ctagaacacagattaaacacagggagcctacctagtcactttta----aaacattcattg 296
|||||||||||||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 293 ctagaacacagattaaacacagggagtctacctagtcac----acagaaaacattcattg 238
Query: 297 tattagtttcttcaatttccctttagttaaaaaaaag 333
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tattagtttcttcaatttccctttagttaaaaaaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_l17.g1 MSMg01no124_l17.g1 CHROMAT_FILE:
MSMg01no124_l17.g1 PHD_FILE: MSMg01no124_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:13 2005
(304 letters)
>mm_chr9_16792483_16793186
Length = 704
Score = 507 bits (262), Expect = e-148
Identities = 292/302 (96%)
Strand = Plus / Plus
Query: 1 tccctgtcccctcccccatgttctttcttcccagaccccgcctgcctcactgtctggcta 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tccctgtcccctcccccatgttctttcttcccagacagtgcctgcctcactgtctggcta 260
Query: 61 ctgtctgacatgtcagatcctgccacctcagctcccagctgttcttcccttttatgcagt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtctgacatgtcagctcctgccacctcagctcccagctgttcttcccttttatgcagt 320
Query: 121 ggattgttctttgctttaaactcaagcatggttttctacttccagacatgtgatctgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggattgttctttgctttaaactcaagcatggttttctacttccagacatgtgatctgttt 380
Query: 181 ccacagcaacccataaaatggggtaatttgatgcaagacctgcctaaaacttttctttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ccacagcaacccataaaatggggtaatttgatgcaagacctgcctaaaagttttctttgc 440
Query: 241 taaaagtttttgtttttttgttaagttcgcattgatcatttccacactaagcaccgcttt 300
|||||||||||| || | ||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 441 taaaagtttttgcttgtgtgttaagttcgcattgagcatttccacactaagcacagcttt 500
Query: 301 ta 302
||
Sbjct: 501 ta 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
