Query= MSMg01no125_h05.b1 MSMg01no125_h05.b1 CHROMAT_FILE:
MSMg01no125_h05.b1 PHD_FILE: MSMg01no125_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:30 2005
(326 letters)
>mm_chr9_28926095_28926818
Length = 724
Score = 526 bits (272), Expect = e-154
Identities = 312/326 (95%), Gaps = 2/326 (0%)
Strand = Plus / Minus
Query: 1 agcaataaggatagcctagttagcaattcatggttagtttttgcaacgtcattcgttaag 60
||||||||||| |||||||| ||||||||||||||||||||| ||||| | | ||||||
Sbjct: 524 agcaataaggagagcctagtcagcaattcatggttagtttttacaacg--aatagttaag 467
Query: 61 ctgtttgccactaattgattgaacgccatgagatcttcctcacaatagcattcatctgta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ctgtttgccactaattgattgaacgccatgagatcttcctcacaatagcattcatctgtt 407
Query: 121 gagtgattagcagctcactaagtgcttttcaattatacctacatatttactttgatcccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 406 gagtgattagcagctcactaagtgcttttcaattatacctacatatttactttgatcctc 347
Query: 181 aaaacccagtaggaagagctgggatctgacattggccacttccttcctccttcagtggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aaaacccagtaggaagagctgggatctgacattggccacttccttcctccttcagtggag 287
Query: 241 tctcattagctctttatggtttgagtgttctgaattaaatggaaaatgcctagccagaat 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 286 tctcattagctctttaaggtttgagtgttctgaattaaatggaaaatgcctagcaagaat 227
Query: 301 atagtccttattatgcgaacagcaaa 326
|||||| |||||||| ||||| ||||
Sbjct: 226 atagtctttattatgtgaacaacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 724
Length adjustment: 9
Effective length of query: 317
Effective length of database: 715
Effective search space: 226655
Effective search space used: 226655
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_h05.g1 MSMg01no125_h05.g1 CHROMAT_FILE:
MSMg01no125_h05.g1 PHD_FILE: MSMg01no125_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:30 2005
(235 letters)
>mm_chr9_28858093_28858727
Length = 635
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%)
Strand = Plus / Plus
Query: 1 gtgtgtgtgtgctcacacgagtgcatgtaagccttcctacgcaaatcaggaaatgacgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 gtgtgtgtgtgctcacacgagtgcatgtaagccttcctacgcaaatcaggaaatgatgaa 260
Query: 61 gccataaagaaaaagattggcagattttattacagacaaatcaaaactgttgtatgacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccataaagaaaaagattggcagattttattacagacaaatcaaaactgttgtatgacaa 320
Query: 121 atggtgttgtgaaataagctaaaatcaggagccagactgggacagacatgcgcagctgtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 atggtgttgtgaaataagctaaaatcaggagccagactgggacagacatgtgcagctgtt 380
Query: 181 tataacaaaggtttaatgtctataatacaaacaacatttgcacaaatcaattt 233
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataacaaagggttaatgtctataatacaaacaacatttgcacaaatcaattt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
