NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAAGCCGCG
GAATTCTTTGTTCATTCCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC
CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
TTTTGTCCTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA
TTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTGCTGTT
CTGTTCAGGAATCTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCCAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA
TCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC
ATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAAT
GCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCC
CTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCCCCAGAGGTTCTTTT
ATCCTTGAGAAGACGTTTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTAAGAGGAATCATGAGATCAAGAGA
AATGATCAATTTCTGAGGCAATTATATTTTCTAAAATGATACTTGCCTTC
ATCAAAATAATATTGAAATCAGTTAAGAACAGTATTTTAAGTCAATAACT
TGCGAAAATCATAATATAAAAACATAGTATTTTCTTTAACTTCCCTGAGC
CTCACATGTCTGTATTGGATAATGGAGATAATAAGCATTTCAAAAAATTA
ATAGGAAAATTAGTTGACCTAACAACAAAACAGAGGACCAGTGTATAATA
TTTAACATACTTATTTAATTATTTTGACTTTATGTACTAATTTTTTTGTG
TGCTACATTGAAAAAAAATCCCTATATTTGTTTTACCTTCAATCATTTAT
ATTCAAGTTTTTGTAGTGTAGAAAAATTCCTGGCAGTGAACTTCTCAAGT
GGTTAAAGTCACTTGACCTTTAGCCTCCTGCTTTAAAAATCCCTCAAGAG
ATATGTTAAATGGCCCAGAAATGTATTGCCTGTCATGTCTTATTGCTTAA
TTAATGACCAAGTAAAACGGCCTATATGACTGCCCTGAAGTAATTGTGAA
CTGATCTACTTAAAAAAAACTGAATGTCCTCAGCTGCAACTGTCATAGCA
CATTTTGCTGCTTTA

Query= MSMg01no125_n09.g1 MSMg01no125_n09.g1 CHROMAT_FILE:
MSMg01no125_n09.g1 PHD_FILE: MSMg01no125_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:00 2005
         (584 letters)



>mm_chr9_90893182_90894165
          Length = 984

 Score = 1122 bits (580), Expect = 0.0
 Identities = 583/584 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actaagaggaatcatgagatcaagagaaatgatcaatttctgaggcaattatattttcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaagaggaatcatgagatcaagagaaatgatcaatttctgaggcaattatattttcta 260

                                                                       
Query: 61  aaatgatacttgccttcatcaaaataatattgaaatcagttaagaacagtattttaagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgatacttgccttcatcaaaataatattgaaatcagttaagaacagtattttaagtc 320

                                                                       
Query: 121 aataacttgcgaaaatcataatataaaaacatagtattttctttaacttccctgagcctc 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataacttgcgaaaatcatagtataaaaacatagtattttctttaacttccctgagcctc 380

                                                                       
Query: 181 acatgtctgtattggataatggagataataagcatttcaaaaaattaataggaaaattag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgtctgtattggataatggagataataagcatttcaaaaaattaataggaaaattag 440

                                                                       
Query: 241 ttgacctaacaacaaaacagaggaccagtgtataatatttaacatacttatttaattatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgacctaacaacaaaacagaggaccagtgtataatatttaacatacttatttaattatt 500

                                                                       
Query: 301 ttgactttatgtactaatttttttgtgtgctacattgaaaaaaaatccctatatttgttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgactttatgtactaatttttttgtgtgctacattgaaaaaaaatccctatatttgttt 560

                                                                       
Query: 361 taccttcaatcatttatattcaagtttttgtagtgtagaaaaattcctggcagtgaactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccttcaatcatttatattcaagtttttgtagtgtagaaaaattcctggcagtgaactt 620

                                                                       
Query: 421 ctcaagtggttaaagtcacttgacctttagcctcctgctttaaaaatccctcaagagata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcaagtggttaaagtcacttgacctttagcctcctgctttaaaaatccctcaagagata 680

                                                                       
Query: 481 tgttaaatggcccagaaatgtattgcctgtcatgtcttattgcttaattaatgaccaagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttaaatggcccagaaatgtattgcctgtcatgtcttattgcttaattaatgaccaagt 740

                                                       
Query: 541 aaaacggcctatatgactgccctgaagtaattgtgaactgatct 584
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaacggcctatatgactgccctgaagtaattgtgaactgatct 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)