Query= MSMg01no127_f01.b1 MSMg01no127_f01.b1 CHROMAT_FILE:
MSMg01no127_f01.b1 PHD_FILE: MSMg01no127_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:01 2005
(450 letters)
>mm_chr9_6374448_6375297
Length = 850
Score = 803 bits (415), Expect = 0.0
Identities = 442/453 (97%), Gaps = 6/453 (1%)
Strand = Plus / Minus
Query: 1 cagaaaagcattatttgaacaaagtggaaattggacagctttagtgactgatcacaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cagaaaagcattatttgaacaaagtggaaattggacagctttagtgactgatcacaacac 591
Query: 61 tgatgttcaaagctctcagatcatgtaatagtcttaagttcaggtacat-gttttgaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 590 tgatgttcaaagctctcagatcatgtaatagtcttaagttcaggtacatagtattgaaag 531
Query: 120 gatgaagaaagcaaggctgatttcagggagcattgaaagttaaaagaaaaatgaaaagct 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gatgaaggaagcaaggctgatttcagggagcattgaaagttaaaagaaaaatgaaaagct 471
Query: 180 tttatcagagagagcaaactggtgggttatgggttacctggctacctttaaaggtaagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tttatcagagagagcaaactggtgggttatgggttacctggctacctttaaaggtaagga 411
Query: 240 accgttgaattatttatt--agtagccaaaggagcttggtaataggtgctacaacaaaat 297
|||||||||||| ||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 410 accgttgaatta---attacagcagccaaaggagcttggtaataggtgctacaacaaaat 354
Query: 298 gctttcccattttccaagccatgattcacagctgcaagcatacacacagaaatcaaaatc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gctttcccattttccaagccatgattcacagctgcaagcatacacacagaaatcaaaatc 294
Query: 358 tgctgaggggcagccagccatggctcagcacctatgggagaaaatggaattcctgactcc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgctgaggggcagccagccatggctcagcacctatgggagaaaatggaattcctgactcc 234
Query: 418 ctttcatcatctggaaaaaacacatgaagacag 450
|||||||| |||||||||||||| |||||||||
Sbjct: 233 ctttcatcgtctggaaaaaacacttgaagacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_f01.g1 MSMg01no127_f01.g1 CHROMAT_FILE:
MSMg01no127_f01.g1 PHD_FILE: MSMg01no127_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:01 2005
(304 letters)
>mm_chr9_6239747_6240450
Length = 704
Score = 565 bits (292), Expect = e-165
Identities = 301/304 (99%)
Strand = Plus / Plus
Query: 1 gtttttgatggggaatgctttaggcctgtagcctgtgattagctttggcaagacccactg 60
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gtttttgatggggaaagctttaggcctgtagcctgtgattagctttggcgagacccactg 260
Query: 61 ctggccaaggtccacatctgttgcagagccataagagaaagtgtatcataaggcatgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggccaaggtccacatctgttgcagagccataagagaaagtgtatcataaggcatgcat 320
Query: 121 tgccttctgccacatctgttcactttgagttcctaagtgatcagtaatagcatgttccag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tgccttctgccacatctgttcactttgagttcctaagtggtcagtaatagcatgttccag 380
Query: 181 gcagcagagagcaggtgaagctcttagcactggggcagccaaaaggaaataattgatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagcagagagcaggtgaagctcttagcactggggcagccaaaaggaaataattgatcat 440
Query: 241 tttctctaacttttttccatgacaggcaaatatttatggggtagggcatgtggttttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctctaacttttttccatgacaggcaaatatttatggggtagggcatgtggttttgtt 500
Query: 301 attt 304
||||
Sbjct: 501 attt 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
