Query= MSMg01no130_c07.b1 MSMg01no130_c07.b1 CHROMAT_FILE:
MSMg01no130_c07.b1 PHD_FILE: MSMg01no130_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:48 2005
(447 letters)
>mm_chr9_82816460_82817307
Length = 848
Score = 762 bits (394), Expect = 0.0
Identities = 434/452 (96%), Gaps = 9/452 (1%)
Strand = Plus / Plus
Query: 1 gaatcaattagaaattattatttaagcataaaagaaactgaattctcaatagcacacctt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gaatcaattagaaattattatttaagcataaaagaaactgaattctcaatagcaaacctt 260
Query: 61 ttgttttgtttacaaacttagtcagaaaacaaagcaaaacaactttttaaaaaatgtctt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ttgttttgtttacaaacttagtcagaaaacaaagcaaaagaactttttaaaaaatgtctt 320
Query: 121 agttttaatacagaaaagaacacttacaggaatgctattggtattattaaaatattgtct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 agttttaatacagaaaagaacacttacaggaatgctattggtattattaaaatactgtct 380
Query: 181 ctaaatatagtcatttaaattctattatatgactatctcaaatacatgcatttaaaacgt 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaatatacccatttaaattctattatatgactatctcaaatacatgcatttaaaacgt 440
Query: 241 caacttttcccaggggttgaaaaaaa-----ctttaacaatacaggattttaattactta 295
||||||||||||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 441 caacttttcccaggg----aaaaaaaaaaaactttaataatacaggattttaattactta 496
Query: 296 agattttacgaacagaattctaattctcctaattggtaaggtagagaaaatgctgaccaa 355
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 497 agattttaagaacagaattctaattctcctaattggtaaggtagagaaaatgctgagtaa 556
Query: 356 tccatcataaaattgaattataagttaattctactaccctttaaaagatagttttaaaac 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tccatcataaaattgaattataagttaattctactaccctttaaaagatagttttaaaac 616
Query: 416 tgtaagtttaggaatgaatctgattattcaga 447
||||||||||||||||||||||||||||||||
Sbjct: 617 tgtaagtttaggaatgaatctgattattcaga 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space: 366206
Effective search space used: 366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_c07.g1 MSMg01no130_c07.g1 CHROMAT_FILE:
MSMg01no130_c07.g1 PHD_FILE: MSMg01no130_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:48 2005
(195 letters)
>mm_chr9_82961967_82962559
Length = 593
Score = 342 bits (177), Expect = 6e-99
Identities = 190/195 (97%), Gaps = 2/195 (1%)
Strand = Plus / Minus
Query: 1 caatttgggacccttaaaaaaaaaacacacctggaatggagtcctaggatgtattaggtg 60
||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 393 caatttgggaccctt--aaaaaaaacacacctggaatggagtcctaggacgtagtaggtg 336
Query: 61 gaggtaaagattggaagtccaaagtcttcctcagccaacctgagattcgtaacaaccttg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaggtaaagattggaagtccaaggtcttcctcagccaacctgagattcgtaacaaccttg 276
Query: 121 tgtcaaacagaatatgcacctcactctatgaaaggtttcaaaggtgacaagtgtcttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgtcaaacagaatatgcacctcactctatgaaaggtttcaaaggtgacaagtgtcttcct 216
Query: 181 ttctagggagctgtg 195
|||||||||||||||
Sbjct: 215 ttctagggagctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 593
Length adjustment: 8
Effective length of query: 187
Effective length of database: 585
Effective search space: 109395
Effective search space used: 109395
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
