Query= MSMg01no131_e03.b1 MSMg01no131_e03.b1 CHROMAT_FILE:
MSMg01no131_e03.b1 PHD_FILE: MSMg01no131_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:25 2005
(672 letters)
>mm_chr9_94648542_94649613
Length = 1072
Score = 1284 bits (664), Expect = 0.0
Identities = 667/668 (99%)
Strand = Plus / Minus
Query: 5 ggaattcttccttctccctccccagtgttgggttttgtttcgacatagagaaatccagag 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ggaattcttcctgctccctccccagtgttgggttttgtttcgacatagagaaatccagag 689
Query: 65 gcacttgacttgctttatggcactggacaagtggtaattatctgtctataattcccttga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gcacttgacttgctttatggcactggacaagtggtaattatctgtctataattcccttga 629
Query: 125 ggggagctgatgtttcaataaattataagagctgggcttgagtggtttacagcaccatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggggagctgatgtttcaataaattataagagctgggcttgagtggtttacagcaccatca 569
Query: 185 aactcttgctatggatgtataatcttacagccacaacttactagggaatagatgtttgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aactcttgctatggatgtataatcttacagccacaacttactagggaatagatgtttgca 509
Query: 245 caatgggtgatttaggagcctcaaccttctcagagagcacggagaactgtcaggcaggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 caatgggtgatttaggagcctcaaccttctcagagagcacggagaactgtcaggcaggct 449
Query: 305 atctccagctgccaccaaaccatccccaaacaacactgaagacagtggtgtctcaatgag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atctccagctgccaccaaaccatccccaaacaacactgaagacagtggtgtctcaatgag 389
Query: 365 ttaccaagttgaacacattagatccccctagtatatataaataaaagatttggtgatatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttaccaagttgaacacattagatccccctagtatatataaataaaagatttggtgatatc 329
Query: 425 ttccctaaaacacttatgtggctgcaggcacgttctctcgcatgtttcatctgttcatac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttccctaaaacacttatgtggctgcaggcacgttctctcgcatgtttcatctgttcatac 269
Query: 485 catctcagaacagagaattttatacagtgcatccatagacacaaagaaagaagaacactt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 catctcagaacagagaattttatacagtgcatccatagacacaaagaaagaagaacactt 209
Query: 545 agatcagtggtgctcggcctgtgggtggtgatcctttgggggtcaaaaggtccttttaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 agatcagtggtgctcggcctgtgggtggtgatcctttgggggtcaaaaggtccttttaca 149
Query: 605 ggggttgcctaagaccaccggaaagcacagatatttacttaatgattcatttttattatt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggggttgcctaagaccaccggaaagcacagatatttacttaatgattcatttttattatt 89
Query: 665 attataac 672
||||||||
Sbjct: 88 attataac 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_e03.g1 MSMg01no131_e03.g1 CHROMAT_FILE:
MSMg01no131_e03.g1 PHD_FILE: MSMg01no131_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:25 2005
(239 letters)
>mm_chr9_94565790_94566426
Length = 637
Score = 447 bits (231), Expect = e-130
Identities = 235/237 (99%), Gaps = 2/237 (0%)
Strand = Plus / Plus
Query: 1 tttgccccaacctggaagcctatattcagaggtggggggagttccaggtactggggccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgccccaacctggaagcctatattcagaggtggggggagttccaggtactggggccac 260
Query: 61 cctataccctctctgtcttgcctgtggagaccaaaaaaaaaaaaagtcagtaagtccatt 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cctataccctctctgtcttgcctgtggagaccaaaaaaaaaaa--gtcagtaagtccatt 318
Query: 121 ttcccttaggactggtctctcaacctgcaggttactgtttctaccgaaggtgacctccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcccttaggactggtctctcaacctgcaggttactgtttctaccgaaggtgacctccag 378
Query: 181 acatttagccaaaagggaggtgactgcaggaaacaaggtgagaatggacaagatgtc 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acatttagccaaaagggaggtgactgcaggaaacaaggtgagaatggacaagatgtc 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 637
Length adjustment: 9
Effective length of query: 230
Effective length of database: 628
Effective search space: 144440
Effective search space used: 144440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
