TXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATGGGCGGAATTCT
CTCTTCTATGCATCAATCAAAAGTTAGCATTTACACATCCCTCTCACTAA
ATAGAAATGCTGGCGCTTTGGGATATTGTTAAAAACCACTGCGGCTGAGC
CCAGAGCCACAGAATACCTTCTTCTGTATCTTCATTCTGACAACTGTGAA
CTCTACTTATTTTCAATTTAGAATCAGCCCCCCTGTAAGGAAACTGTGTG
CATTTGGCAAAAGAGCCAACCTATGTTTTTCCTTGATTTGTTGGTGAACT
GCTAATACTTTGTTTCTTCCTTGAAGAAATAAATATTTAGGGACAAATGA
AGACATTGTACCATAGAATTGATGATCTTTAGTGAAGTCATTTTAAAGAA
CACAGTCATGGTTCAATTTTCTTTTTTAGTTCTAATTTTCTTTCTTTTAA
GAAATATTTATGCATTTATTTTAATTTTCTACGCATATGACTGTTTGTCT
GCATGGATGTTTTTGAGCCACCTACATGCCTGGTGCCCAAGGAAGTTAGG
AGAAGGGTGTTGAATTCCATGAGACAGCAGTTTTCGATGTTTGTGAACCA
CCATGTGGGTACTGGGAATCAAATCCAAGTCCTTGTCAAGAACAGCAAAT
GCTCTTAACCACAGAACCATTTCTTCAGTCCCCTCTGGCTCTAATTTCCA
AAGTGAAATGATCATATATTTTTGTCTTTAT

ATGAAGTGGTAGGCTGGCGGCGCCTGTTCAAAAATGGAGGTGACCTATAG
AATTTCCGCGGAATTCTCCATATAGTTTCAATGCCAGTCCCTTGTTGGAT
GTTTGCTTGGAAAGTGTGTTCTTCTAACCTGTGGGTCGTCTCCTCCCTCT
ATTATAATTTCCTTTATAATAAGGTAGCTAATCCCATGAAGTCCCATTTG
TTAGTGTTTCAATTATGTTTCCTATCTAATGTCCTGGAGTCTTTAGGTTT
CCTTATTGTAAATTTTATAATTTCAAATTTTACATGTAGGTCTTCAATCA
ATTTTGAGTCAATTGTTATAAACAGCAAAAGGTAAGGAGCTGGTTCCAAT
CATCAGTATCTGGAGATCCAAACCTCTCAGTAACATCTATTGGAAGACTC
ATTTTCCAATGCATACTCATAACAACTTTGTCAAATATCAACTGGCTGCT
GATGTAGTTTACATCTGGAATCTCTATTCTGTCCCATTGGTTTATGCATC
AACCATTTTTATTTTTGTAGTCTAAATAATACCTGGTACCACATAATAGA
TATTCATAAAATAAATTTTGTATTTAAATGAATGAATATGGCCAGGCATG
ATGGAGCATACCTTTAAGTACTTGTGAGGCAGAGACAGGCAGATCTTTGT
GAATTGGAGGACTGCCTGGTCTACAAAGTAAGTTCCAGAAGAGCC

Query= MSMg01no132_a18.b1 MSMg01no132_a18.b1 CHROMAT_FILE:
MSMg01no132_a18.b1 PHD_FILE: MSMg01no132_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:27 2005
         (686 letters)



>mm_chr9_80202296_80203379
          Length = 1084

 Score = 1149 bits (594), Expect = 0.0
 Identities = 664/692 (95%), Gaps = 10/692 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattctctcttctatgc-atcaatcaaaagttagcatttacacatccctctcactaaat 61
           ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 195 gaattctctcttctaagccatcaaccaaaagttagcatttacacatccctctcactaaat 254

                                                                       
Query: 62  agaaatgctggcgctttgggatattgttaaaaaccactgcggctgagcccagagccacag 121
           ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 255 agaaaggctggcactttgggatattgttaaaaaccactgcggctgagtccagagccacag 314

                                                                       
Query: 122 aataccttcttctgtatcttcattctgacaactgtgaactctacttattttcaatttaga 181
           ||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 315 aataccttcttctctatcttcattctgacaaccgtgaactctacttattttcagtttaga 374

                                                                       
Query: 182 atcagcccccct-------gtaaggaaactgtgtgcatttggcaaaagagccaacctatg 234
           |||||||||||        ||||||||||||||  |||||||||||||||||||||||||
Sbjct: 375 atcagccccccccccccccgtaaggaaactgtg--catttggcaaaagagccaacctatg 432

                                                                       
Query: 235 tttttccttgatttgttggtgaactgctaatactttgtttcttccttgaagaaataaata 294
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 433 tttttccttgatttgttggtgaactgctaatactttgtttcttctttgaagaaatgaata 492

                                                                       
Query: 295 tttagggacaaatgaagacattgtaccatagaattgatgatctttagtgaagtcatttta 354
           || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 ttgagggacaaatgaagacattgtaccatagaattgatgatcttcagtgaagtcatttta 552

                                                                       
Query: 355 aagaacacagtcatggttcaattttcttttttagttctaattttctttcttttaagaaat 414
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aagaatacagtcatggttcaattttcttttttagttctaattttctttcttttaagaaat 612

                                                                       
Query: 415 atttatgcatttattttaattttctacgcatatgactgtttgtctgcatggatgtttttg 474
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atttatgtatttattttaattttctacgcatatgactgtttgtctgcatggatgtttttg 672

                                                                       
Query: 475 agccacctacatgcctggtgcccaaggaagttaggagaagggtgttgaattccatgagac 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agccacctacatgcctggtgcccaaggaagttaggagaagggtgttgaattccatgagac 732

                                                                       
Query: 535 agcagttttcgatgtttgtgaaccaccatgtgggtactgggaatcaaatccaagtccttg 594
           ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 733 agcagttatcgatgtttgtgaaccaccatgtggggactgggaatcaaattcaagtccttg 792

                                                                       
Query: 595 tcaagaacagcaaatgctcttaaccacagaaccatttcttcagtcccctctggctctaat 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tcaagaacagcaaatgctcttaaccacagaaccatttcttcagtcccctctggctctaat 852

                                           
Query: 655 ttccaaagtgaaatgatcatatatttttgtct 686
           ||||||||||||||||||||||||||||||||
Sbjct: 853 ttccaaagtgaaatgatcatatatttttgtct 884


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1084
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1074
Effective search space:   726024
Effective search space used:   726024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)