AATTTGCGGCGCTATACGACTCCTATTTCGAGAGGAGCCGCGGAATTCAT
CACACTTCCTATACTGGGTGGCCGTGATGATCTCTGGGGCAAGGCGGGAC
TGGTCTCGGAGGATCTGGGGGTCCACCAGGTGGCTCTTCTGCTTGGCCTG
AGAGAAGTTACTCACAATGAGCCTTGTGGGACAAGCTAAGGTGGGGCAAG
GGTCTGCAGGAGAAGGGCCCTGGGCAGCTCCCCCAGGTTGGTGCTGGACA
AGCAGCAAGTTCTCCAGGCGAAGATCGCAGTGCGTGACGTGGTAGGGCTT
GAGGTGCTCAAGCCCATAGCACAGCTGTAAGAGCAGCAGACACACTTGCC
TCTCATACAAGTCAGGGCTGTTCCCATGATGGGCCAAAGAATCTCGCACG
AAGTCAGCCACAGTGAGATGGGGAACCTCCCTGGTGATGACCACAACGTG
GCTTCTTTGTTTCCTGTTTGTGACTCGTTGGTTCTCTTTCTGGGATGGCT
CTGTTTCAGAGCAGGGCTCAGGATTTCCCCCCAAAGTTTCTGCCTTCCCC
TCTTCTTCGCTGTCTTCAGTGCCATCCTCTGCCTTTTCAGGAGCATCAGG
ATCCTCCCAGGGAAGCAGACGACTAGGGACTTCAGCAAGGAAATGGCCAC
AATCCTGCTGGATGTTAAAATGCACAGGCAGACTCTGCCGGACAGCCAG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTTTCATCCTTTGCTTCAGTACTGATTTCTTTTG
TTCAGTCTAGCCACAGATTTCTTAGTGTTATTAATACTTGCTCAAAAAAA
CAAAACAAAACAGTCTTCAGTTTCATGGATTTTTCTCTGGTTTTCGGCTG
GCTATTTTATTTATTTGTTTAGTTTTTGTTATTATCCACTTATTTTGATT
TAATTTGCTTTCCCCCACCCCATAGAATCTTAGGCAATTGCTTTTAGTCT
TTTACCTCCTTAATAAAAGTAGAAGAAACTATAAATGTGCTCAGAACATC
TTATGAGAAGCATCTTGCACATTTTGTATTTAGATTTCCACTTTTATTTG
ACTCAAATTATTTTATATTTTACTATGATTTTCTCATTTACTGTATAGAT
TATTTTAGAAGTATATTGTTTGATTTCTGAATGTTTGGGGCTTTGTAGAA
TCTCTCTCTTGCTGTTTTCTGACTTGATTTCATGTGGTTTCCGTTCCTTC
GGTTTATACAGCCTTATTCTTGTTGGGGCAGCGGTGTGTTCTGAGAAACG
CCTTGGTCATCCTAAAGGCGCTGCGCTGCTGTGGACCAGTGTTGAGTGAT
GCTCTGTGTTGAGCGATGCTCAGTGTTCAGTGATGCTCAGCTTT

Query= MSMg01no132_f17.b1 MSMg01no132_f17.b1 CHROMAT_FILE:
MSMg01no132_f17.b1 PHD_FILE: MSMg01no132_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:51 2005
         (650 letters)



>mm_chr9_56054514_56055563
          Length = 1050

 Score = 1222 bits (632), Expect = 0.0
 Identities = 644/648 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattcatcacacttcctatactgggtggccgtgatgatctctggggcaaggcgggact 62
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcatcacacttcttatactgggtggccgtgatgatctctggggcaaggcgggact 262

                                                                       
Query: 63  ggtctcggaggatctgggggtccaccaggtggctcttctgcttggcctgagagaagttac 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggtctcggaggatctgggggtccaccaggtggctcttctgcttggcctgagagaagttac 322

                                                                       
Query: 123 tcacaatgagccttgtgggacaagctaaggtggggcaagggtctgcaggagaagggccct 182
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcacaatgagccttgtaggacaagctaaggtggggcaagggtctgcaggagaagggccct 382

                                                                       
Query: 183 gggcagctcccccaggttggtgctggacaagcagcaagttctccaggcgaagatcgcagt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gggcagctcccccaggttggtgctggacaagcagcaagttctccaggcgaagatcgcagt 442

                                                                       
Query: 243 gcgtgacgtggtagggcttgaggtgctcaagcccatagcacagctgtaagagcagcagac 302
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 gcgtgacgtggtagggcttgaggtgctcaagcccagagcacagctgtaagagcagcagac 502

                                                                       
Query: 303 acacttgcctctcatacaagtcagggctgttcccatgatgggccaaagaatctcgcacga 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acacttgcctctcatacaagtcagggctgttcccatgatgggccaaagaatctcgcacga 562

                                                                       
Query: 363 agtcagccacagtgagatggggaacctccctggtgatgaccacaacgtggcttctttgtt 422
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtcggccacagtgagatggggaacctccctggtgatgaccacaacgtggcttctttgtt 622

                                                                       
Query: 423 tcctgtttgtgactcgttggttctctttctgggatggctctgtttcagagcagggctcag 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcctgtttgtgactcgttggttctctttctgggatggctctgtttcagagcagggctcag 682

                                                                       
Query: 483 gatttccccccaaagtttctgccttcccctcttcttcgctgtcttcagtgccatcctctg 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gatttccccccaaagtttctgccttcccctcttcttcgctgtcttcagtgccatcctctg 742

                                                                       
Query: 543 ccttttcaggagcatcaggatcctcccagggaagcagacgactagggacttcagcaagga 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccttttcaggagcatcaggatcctcccagggaagcagacgactagggacttcagcaagga 802

                                                           
Query: 603 aatggccacaatcctgctggatgttaaaatgcacaggcagactctgcc 650
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aatggccacaatcctgctggatgttaaaatgcacaggcagactctgcc 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no132_f17.g1 MSMg01no132_f17.g1 CHROMAT_FILE:
MSMg01no132_f17.g1 PHD_FILE: MSMg01no132_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:51 2005
         (324 letters)



>mm_chr9_56174226_56174949
          Length = 724

 Score =  611 bits (316), Expect = e-179
 Identities = 322/324 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attttgtatttagatttccacttttatttgactcaaattattttatattttactatgatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 692 attttgtatttagatttccacttttatttgactcaaattattttatattttcctatgatt 633

                                                                       
Query: 61  ttctcatttactgtatagattattttagaagtatattgtttgatttctgaatgtttgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttctcatttactgtatagattattttagaagtatattgtttgatttctgaatgtttgggg 573

                                                                       
Query: 121 ctttgtagaatctctctcttgctgttttctgacttgatttcatgtggtttccgttccttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctttgtagaatctctctcttgctgttttctgacttgatttcatgtggtttccgttccttc 513

                                                                       
Query: 181 ggtttatacagccttattcttgttggggcagcggtgtgttctgagaaacgccttggtcat 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 512 ggtttatacagccttattcttgttgaggcagcggtgtgttctgagaaacgccttggtcat 453

                                                                       
Query: 241 cctaaaggcgctgcgctgctgtggaccagtgttgagtgatgctctgtgttgagcgatgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cctaaaggcgctgcgctgctgtggaccagtgttgagtgatgctctgtgttgagcgatgct 393

                                   
Query: 301 cagtgttcagtgatgctcagcttt 324
           ||||||||||||||||||||||||
Sbjct: 392 cagtgttcagtgatgctcagcttt 369


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space:   225225
Effective search space used:   225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)