Query= MSMg01no136_h24.b1 MSMg01no136_h24.b1 CHROMAT_FILE:
MSMg01no136_h24.b1 PHD_FILE: MSMg01no136_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:54 2005
(637 letters)
>mm_chr9_27307315_27308351
Length = 1037
Score = 1166 bits (603), Expect = 0.0
Identities = 627/635 (98%), Gaps = 2/635 (0%)
Strand = Plus / Minus
Query: 4 gaattctctggttcc-cctttatcttcagcattccatgccccacagcatgtataaggaac 62
||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaattctctgg-gcctcttttatcttcagcattccatgccccacagcatgtataaggaac 779
Query: 63 tactgccaaagaaattggcaagtgctcttgttcaaagtatgtattaagctcccagctgag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tactgccaaagaaattggcaagtgctcttgttcaaagtatgtattaagctcccagctgag 719
Query: 123 aggcctgcactgtgctggtgaatgagagagtaggcggcagatgacagagtcaagcaggag 182
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aggcctgcactgtgccggtgaatgagagagtaggcggcagatgacagagtcaagcaggag 659
Query: 183 cagaaccagaaagctgtggctatctcctctgagatttcacaccctgaacctggaccctta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cagaaccagaaagctgtggctatctcctctgagatttcacaccctgaacctggaccctta 599
Query: 243 gctcacctgtcactcaagatggtaatcaagacacatctatagtctcctccctcaagtaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gctcacctgtcactcaagatggtaatcaagacacatctatagtctcctccctcaagtaac 539
Query: 303 tggggggaaataattggttctgccagaatccttgccacctaacaacactggtggtgtctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tggggggaaataattggttctgccagaatccttgccacctaacaacactggtggtgtctg 479
Query: 363 tctgttatgcgcttattttacaaaatcaaaaccctgaagaggagtcattaaaatattcta 422
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tctgttatgtgtttattttacaaaatcaaaaccctgaagaggagtcattaaaatattcta 419
Query: 423 attatttgtactgggtattcattttcctcaatccctattaaaagtatgtatgcaaatgtg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 attatttgtactgggtattcattttcctcaatccctattaaaagtatgtatgcaaatgtg 359
Query: 483 aagtggttctggccttctcttgggcctgctgcctccaaccaagcctcacatgtttgcctt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aagtggttctggccttctcttgggcctgctgcctccaaccaagcctcacatgtttgcctt 299
Query: 543 atgaaaatgtgttagttgagttcctttaaaaattgttatttggtttttaaagggttgttc 602
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 298 atgaaaatgtgttagttgagttcctttaaaaattgatatttggtttttaaagggttgttc 239
Query: 603 caccatttctatctcaaacaggcaaaataattaat 637
|||||||||||||||||||||||||||||||||||
Sbjct: 238 caccatttctatctcaaacaggcaaaataattaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_h24.g1 MSMg01no136_h24.g1 CHROMAT_FILE:
MSMg01no136_h24.g1 PHD_FILE: MSMg01no136_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:54 2005
(167 letters)
>mm_chr9_27148093_27148660
Length = 568
Score = 313 bits (162), Expect = 3e-90
Identities = 165/166 (99%), Gaps = 1/166 (0%)
Strand = Plus / Plus
Query: 1 aggtccttggttttcttttcaggca-cacaaagaacattgtccaagttaagaaggggtga 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtccttggttttcttttcaggcaacacaaagaacattgtccaagttaagaaggggtga 260
Query: 60 tgtgggctccctctaaaatcccttctagctgctgctttgggggaagatctctgggtagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgggctccctctaaaatcccttctagctgctgctttgggggaagatctctgggtagag 320
Query: 120 ttgggttaggggaagagaaggggattggacactggcatattgggtt 165
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgggttaggggaagagaaggggattggacactggcatattgggtt 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 568
Length adjustment: 8
Effective length of query: 159
Effective length of database: 560
Effective search space: 89040
Effective search space used: 89040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
