ATTGNNNNNNATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTACAGTATAATCAACAATAGTATTCAGATACAGTGC
TTTTTCCAGAAAGGTTTAATTTTATGTTCAAAGCCCAATTATTTTTAACA
CTGATATCTATGAAAAATAAAGGTATACATTTCAAAAACTTTGTAGTCAC
AAAGTACCATGTAGTCTAAAACCTACCATGAATTTTTCCAATTTCCTACA
GACATTTAAATAAACAAAAAAGCAAAGTCATGAGTTACAAAATCTGGAGA
TAGTTTTAAAGAAAACCCGCCCTCAGGCCCTCAAGCACTCTGTGTACAAG
GATCTCGAGCTCAGAAGAAAGACTGCAGCAGCATGTGAGCTGTGCGTGAC
ACATAGGAATGCAGCTCATCAAACCCACTACCAAAGTAATGGGAGCATTC
TAATTACTGAAATCTATAGTGGGGACTTACTAAGAATGAAGGAACTCGTC
ACGTGTGTCCACACAGTGGCTGTAAAACTAAAGGATAAACACAACCTCTA
ATTTGTGTCATAAAGCATGAAGCTCTCACTTACTTTAATTATCTGTTCAA
ATGCTAAGGCAGACTGCAGCATCATTGGCCTCTGACTCTGAATCATCTGT
TGATCAATGGAATTGTAAAAATGTGCCACCTACAAAATACAAGTA

NNTTTTCCCCCAAGCAGTGGCAGGXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAGGGAGCTTGAGGTTGCGA
GTGGGTTTGATGGCGGCTAGTGCTAACACAAGCTAGCACACATACCCCAC
GAAATGCACCCCGGTAGTGAGGTGGATTGGAGGAACACGAGTAAGGCAAA
AAAGAAGTAAACAGAACCCAGGAAGTTATGTAATGAGATTGCGCTCTATA
ACACCCCAGATAATAATCTCACGATCCGGCAGAGATTACTTACAATGAGA
TATCTGCGCGGGAACTTTTCGGCTCAAAGGCTTTGACGAAGTCCACACTT
GAACGATGGCATCTTACCGCACAACATAGTACAACGTGGAAGGATGCTTC
GGGTGTTTGAAACATCCGATAGGTTGGAGGATACGACGCCGGTGTTGCCC
GCGCCATGTTGGTTCACCCCACTACCGTGTCTCCCGCTTACTGTGTATAA
TCCGGCTGTTGTTGTAGTGAGCAGTGGATCGCCGTTCCTGCTATTATCAA
ACAGCCCGCATTTTTAGTATTTCCCACACCACAAACATATTTTGTGAATA
ACCTCGCGCCGCTTATTAAGGGGTCCACGGGACCCCACTAACCACCACAG
CGCCGCGTTTAATTGCGTTTAAGTACCGTTTTCCCGTTCGCTACGTATGG
TGTGTTGTTCGAGTGTTCGCTTGTTACCTTGTTCCTGCGAAAATGGAGGT
TACGAGTAAGTATAAGACATATGACCGAATTTCCAGTTGTCCGCCATCCT
ACCN

Query= MSMg01no136_k14.b1 MSMg01no136_k14.b1 CHROMAT_FILE:
MSMg01no136_k14.b1 PHD_FILE: MSMg01no136_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:07 2005
         (641 letters)



>mm_chr9_7159425_7160465
          Length = 1041

 Score = 1178 bits (609), Expect = 0.0
 Identities = 630/637 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctacagtataatcaacaatagtattcagatacagtgctttttccagaaaggttta 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattctacagtataataaacaatagtattcagatacagtgctttttccagaaagtttta 264

                                                                       
Query: 65  attttatgttcaaagcccaattatttttaacactgatatctatgaaaaataaaggtatac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attttatgttcaaagcccaattatttttaacactgatatctatgaaaaataaaggtatac 324

                                                                       
Query: 125 atttcaaaaactttgtagtcacaaagtaccatgtagtctaaaacctaccatgaatttttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttcaaaaactttgtagtcacaaagtaccatgtagtctaaaacctaccatgaatttttc 384

                                                                       
Query: 185 caatttcctacagacatttaaataaacaaaaaagcaaagtcatgagttacaaaatctgga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caatttcctacagacatttaaataaacaaaaaagcaaagtcatgagttacaaaatctgga 444

                                                                       
Query: 245 gatagttttaaagaaaacccgccctcaggccctcaagcactctgtgtacaaggatctcga 304
           ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 gatagttttaaagaaaaacagccctcaggccctcaagctctctgtgtacaaggatctcga 504

                                                                       
Query: 305 gctcagaagaaagactgcagcagcatgtgagctgtgcgtgacacataggaatgcagctca 364
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 gctcagaagaaagactgcagcagcatgtgagctgtgcatgacacataggaatgcagctca 564

                                                                       
Query: 365 tcaaacccactaccaaagtaatgggagcattctaattactgaaatctatagtggggactt 424
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaaacccactaccaaagtaatgggagcattctaattactgaaatctatagtggggactt 624

                                                                       
Query: 425 actaagaatgaaggaactcgtcacgtgtgtccacacagtggctgtaaaactaaaggataa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 actaagaatgaaggaactcgtcacgtgtgtccacacagtggctgtaaaactaaaggataa 684

                                                                       
Query: 485 acacaacctctaatttgtgtcataaagcatgaagctctcacttactttaattatctgttc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acacaacctctaatttgtgtcataaagcatgaagctctcacttactttaattatctgttc 744

                                                                       
Query: 545 aaatgctaaggcagactgcagcatcattggcctctgactctgaatcatctgttgatcaat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaatgctaaggcagactgcagcatcattggcctctgactctgaatcatctgttgatcaat 804

                                                
Query: 605 ggaattgtaaaaatgtgccacctacaaaatacaagta 641
           |||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggaattgtaaaaatgtgccacctacaaaatacaagta 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)