Query= MSMg01no136_m12.b1 MSMg01no136_m12.b1 CHROMAT_FILE:
MSMg01no136_m12.b1 PHD_FILE: MSMg01no136_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:16 2005
(370 letters)
>mm_chr9_111560294_111561064
Length = 771
Score = 630 bits (326), Expect = 0.0
Identities = 356/366 (97%), Gaps = 1/366 (0%)
Strand = Plus / Minus
Query: 6 ggaattcactattgatctttgtctttcccttc-aatgcatgttgacatgcatagctctct 64
|||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 434 ggaattcactattgatctttgtctttcctttcaaatgcatgttgacatgaatagctctct 375
Query: 65 ctgatggcttgccatctcactcctcagaactgctcagtgtactgtcagggaccagatgtt 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 374 ctgatggcttgccatctcactcctcagaactgttcagtgtactgtcagggaccagatgtt 315
Query: 125 tagggaatatggagtctctttctattccatagggatgtcttatagccaccctgataccta 184
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 314 tagggaatatggagtctctttctgttccatagggatgtctaatagccaccctgataccta 255
Query: 185 gcatgtggattttttttctctataacttgaatgattaaaagtcaggaaggctgggcagtg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 acatgtggattttttttctctataacttgaatgattaaaagtcaggaaggctgggcagtg 195
Query: 245 gtggcacatgcctttgatcccatcacttggtaggcagaggtaggcaaatttctgagttcg 304
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 194 gtggcacatgcctttgatcccagcacttgggaggcagaggtaggcaaatttctgagttcg 135
Query: 305 aggccagcctggtttacagggtgagttccaagacagccagggatacacagagaaaccctg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 134 aggccagcctggtttacagggtgagttccaagacagccagggatacacagagaaactctg 75
Query: 365 tctcaa 370
||||||
Sbjct: 74 tctcaa 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 771
Length adjustment: 9
Effective length of query: 361
Effective length of database: 762
Effective search space: 275082
Effective search space used: 275082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_m12.g1 MSMg01no136_m12.g1 CHROMAT_FILE:
MSMg01no136_m12.g1 PHD_FILE: MSMg01no136_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:16 2005
(437 letters)
>mm_chr9_111476057_111476893
Length = 837
Score = 793 bits (410), Expect = 0.0
Identities = 430/442 (97%), Gaps = 10/442 (2%)
Strand = Plus / Plus
Query: 1 ctatgttattagccttacaaagttggtagacagtgggtatcacccatctctattctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatgttattagccttacaaagttggtagacagtgggtatcacccatctctattctgact 260
Query: 61 gactgcttatgtctacggcctccactgttttattttgtgcagtatcagaagcactctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgcttatgtctacggcctccactgttttattttgtgcagtatcagaagcactctttt 320
Query: 121 aaaaaccctcatttttgagatccttgggagccggacagagcagagcagaacggagcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaccctcatttttgagatccttgggagccggacagagcagagcagaacggagcagag 380
Query: 181 cagattagattcctgtgttcactttgttctcctgcctcaatctcttctgcggtcactgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagattagattcctgtgttcactttgttctcctgcctcaatctcttctgcggtcactgcc 440
Query: 241 aagtcgcagttattttggtccaggcttcccatgtaggcaccacgccatgctccctgcggt 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtctcagttattttggtccaggcttcccatgtaggcaccacgccatgctccctgcggt 500
Query: 301 tccacagaaaactatggagacagtgatcagtggaacctgccaccccc-----attcaagg 355
||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 501 tccacagaaaactatggagacagtgatcagtggaacctgtca-----ggtttattcaagg 555
Query: 356 gcagctcagaaggaagactccagtcatggattgctacctttggaaggctcaggtgtgtga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcagctcagaaggaagactccagtcatggattgctacctttggaaggctcaggtgtgtga 615
Query: 416 agagctctcatggagccccaag 437
||||||||||||||||||||||
Sbjct: 616 agagctctcatggagccccaag 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
