Query= MSMg01no136_n05.b1 MSMg01no136_n05.b1 CHROMAT_FILE:
MSMg01no136_n05.b1 PHD_FILE: MSMg01no136_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:20 2005
(644 letters)
>mm_chr9_22829446_22830490
Length = 1045
Score = 1162 bits (601), Expect = 0.0
Identities = 631/641 (98%), Gaps = 1/641 (0%)
Strand = Plus / Plus
Query: 5 gaattctgttc-attcaaacttgccgttacgtgtgctgtgcgaaagaacattaggggtat 63
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgttcaattaaaacttgccgttacgtgtgctgtgcgaaagaacattaggggtat 264
Query: 64 aaataacagtcaactttgtctcaggggaaactggaaatttagttttgggacaagatagat 123
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagtaacagtcaactttgtctcaggggaaactggaaatttagttttgggacaagatagat 324
Query: 124 aaaactatagtcaataatataagctgtccacgatgagtgtcaaatatttggcacagtact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaactatagtcaataatataagctgtccacgatgagtgtcaaatatttggcacagtact 384
Query: 184 aggtgatttcatgcttgctgccgggaaacagagagcagagagaaccaggggctgctgagt 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtgatttcatgtttgctgccgggaaacagagagcagagagaaccaggggctgctgagt 444
Query: 244 ccatgactggatcagccagatgactcatggcagcataggatgtcagggccggaacggcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccatgactggatcagccagatgactcatggcagcataggatgtcagggccggaacggcct 504
Query: 304 ggagaacgactactccgatctctgcacatggaataagcattctgacttagcagtgactga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggagaacgactactccgatctctgcacatggaataagcattctgacttagcagtgactga 564
Query: 364 gctcctacccacacgacagctgcactgccagtcccaccagaggctctccaaggtgacgtg 423
|||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 565 gctcctacccacacgatagctgcactgtcagtcccaccaaaggctctccaaggtgacgtg 624
Query: 424 ggctagctacctcaggctgtgttcacttcaggttctcaacactgagaacagttgtcactc 483
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 ggctagctacctcaggctgtgttcactccaggttctcaacactgagaacagttgtcactc 684
Query: 484 agcctactacagttccattgaacctgctagtgccaacaccagagtcccattgctgtgaga 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcctactacagttccattgaacctgctagtgccaacaccagagtcccattgctgtgagt 744
Query: 544 ggggtcccggggtacaaaggcaatcaaggctgagggacttgtcagatgtgctccttggct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggggtcccggggtacaaaggcaatcaaggctgagggacttgtcagatgtgctccttggct 804
Query: 604 caaactctttctctctgattggggctctaggtcttaagaga 644
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 805 caaactctttctctctgactggggctctaggtcttaagaga 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space: 656190
Effective search space used: 656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_n05.g1 MSMg01no136_n05.g1 CHROMAT_FILE:
MSMg01no136_n05.g1 PHD_FILE: MSMg01no136_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:20 2005
(646 letters)
>mm_chr9_22997717_22998762
Length = 1046
Score = 1197 bits (619), Expect = 0.0
Identities = 639/646 (98%)
Strand = Plus / Minus
Query: 1 agttccttgtgcttatatgataagcacttcgccatgtaagccattcccgcaagcccctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 agttccttgtgcttatatgataagcacttcgccatgtaagccattcccgcaagcccctga 787
Query: 61 ccacatgaatgatagcctctggctgaggatcactcactgtgttgctgttgtatagttctg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ccacatgaacgatagcctctggctgaggatcactcactgtgttgctgttgtatagttctg 727
Query: 121 cgtgaccactgagctctttatttaactcatcagttttagacaccttagtttcaaggatgg 180
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 catgaccactgagctttttatttaactcatcagttttagacaccttagtttcaaggatgg 667
Query: 181 ctgctagaagaggcaggccaagttattctgcaagaaagcatgaaccccagccttgaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctgctagaagaggcaggccaagttattctgcaagaaagcatgaaccccagccttgaaaag 607
Query: 241 ctgaggttttaggctaatgaagattcaagtcaacagtgaggggtaacagaaaggcacctg 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctggggttttaggctaatgaagattcaagtcaacagtgaggggtaacagaaaggcacctg 547
Query: 301 gtgcattgatactgtggtctgggtgggaaatagtacaaaagcccttcttctggaagtcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtgcattgatactgtggtctgggtgggaaatagtacaaaagcccttcttctggaagtcat 487
Query: 361 ctcttaggaaacagaccatacattttgacacaaagaaactgtacttatttggggtgtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctcttaggaaacagaccatacattttgacacaaagaaactgtacttatttggggtgtgat 427
Query: 421 ttttaaaacctagcttaaaattaggatggctcctggggtttgatggactaaggcaataga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttttaaaacctagcttaaaattaggatggctcctggggtttgatggactaaggcaataga 367
Query: 481 agcttcatgtgggcgagtgccccagcgctcctatcagcctttgttatgagaaggaggaga 540
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 366 agcttcatgtaggcgagtgccccagtgctcctatcagcctttgttatgagaaggaggaga 307
Query: 541 accagagcctggctctcagctctgagcacaatggatttcttgggaacacagtaatgttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 accagagcctggctctcagctctgagcacaatggatttcttgggaacacagtaatgttat 247
Query: 601 ccatggctttattcacatatgaattgnaaagaaaaagcccatcctt 646
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 246 ccatggctttattcacatatgaattggaaagaaaaagcccatcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
