Query= MSMg01no137_j09.b1 MSMg01no137_j09.b1 CHROMAT_FILE:
MSMg01no137_j09.b1 PHD_FILE: MSMg01no137_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:19 2005
(271 letters)
>mm_chr9_73390097_73390766
Length = 670
Score = 443 bits (229), Expect = e-129
Identities = 261/273 (95%), Gaps = 5/273 (1%)
Strand = Plus / Plus
Query: 1 gaattcacttacc--tttcattctcttcttctattcatttttgtttgaaaaagacattat 58
||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcatttaccagtt--attctcttcttctattcatttttgtttgaaaaagacattat 258
Query: 59 tgactacctcgactcaacgtagaaccagtaactaatgacagaagccttcttgggcaccca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgactacctcgactcaacgtagaaccagtaactaatgacagaagccttcttgggcaccca 318
Query: 119 aggaaccaaacagtcctctactcccacccccccaagagttcctaagagacagccttgaaa 178
|||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 319 aggaaccaaacagtcccctactcctacccccc-aagagttcctaagagacagccttgaaa 377
Query: 179 tatttacacctaatccagccagttttggtaataatagttccagtaaagaaatggactgaa 238
|||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 378 tatttacacctaatccagccagttttgggaacaatggttccagtaaagaaatggactgaa 437
Query: 239 ccagagtaagtgaacaatgtgtgtgcaagcaga 271
||||||||||||||||||| |||||||||||||
Sbjct: 438 ccagagtaagtgaacaatgcgtgtgcaagcaga 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 670
Length adjustment: 9
Effective length of query: 262
Effective length of database: 661
Effective search space: 173182
Effective search space used: 173182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no137_j09.g1 MSMg01no137_j09.g1 CHROMAT_FILE:
MSMg01no137_j09.g1 PHD_FILE: MSMg01no137_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:19 2005
(172 letters)
>mm_chr9_73561558_73562125
Length = 568
Score = 275 bits (142), Expect = 1e-78
Identities = 163/172 (94%), Gaps = 4/172 (2%)
Strand = Plus / Minus
Query: 1 gctgtaagttgagactctaattacttgctgaaaggcagcctcagaatggctctaacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 368 gctgtaagttgagactctaattacttgctgaaaggcagcctcagaatggctct----aac 313
Query: 61 agcacattcctagctgaagatttctctctgtccctgccctcctgcaccactctgagttaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 312 agcacattcctagctgaagatttctctctgtccctgccctcctgcaccaccctgagttaa 253
Query: 121 agtgagattgcttacaatttctggaagacattttagagtgcagtcaccatag 172
|||||||||||||||||| ||| ||||| ||||||||||||||| |||||||
Sbjct: 252 agtgagattgcttacaatctctagaagagattttagagtgcagttaccatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 568
Length adjustment: 8
Effective length of query: 164
Effective length of database: 560
Effective search space: 91840
Effective search space used: 91840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
