Query= MSMg01no139_h05.b1 MSMg01no139_h05.b1 CHROMAT_FILE:
MSMg01no139_h05.b1 PHD_FILE: MSMg01no139_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:51 2005
(423 letters)
>mm_chr9_28451586_28452410
Length = 825
Score = 758 bits (392), Expect = 0.0
Identities = 413/420 (98%), Gaps = 2/420 (0%)
Strand = Plus / Plus
Query: 6 gaattcttac-cagccagctgattgaag-acatgttctgcaagtttatgattctgcaaac 63
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 206 gaattcttacacagccagctgattgaagcacgtgttctgcaagtttatgattctgcaaac 265
Query: 64 actaggttgcagccaggagggtattttgccatatcatgtcccttaatcaacaccctcaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 actaggttgcagccaggagggtattttgccatatcatgtcccttaatcaacaccctcaca 325
Query: 124 tctgtcaatactgtcagcttgcagcttggattcctcagtccactcaggaaaatagcaccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctgtcaatactgtcagcttgcagcttggattcctcagtccactcaggaaaatagcaccc 385
Query: 184 tacactggccacaaggacaaaaatagatttccagagaaaaagggagccttggtttcaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tacactggccacaaggacaaaaatagatttccagagaaaaagggagccttggtttcaaat 445
Query: 244 gctgtttccttcttacactgaatagatgaacatttacattatggaaataatgaaatgttc 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gctgtttccttctcacactgaatagatgaacatttacattatggaaataatgaaatgttc 505
Query: 304 atcagactttgtaatgacactggatggtcacaggccttcttttcttcacttaacagcata 363
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atcagacttggtaatgacactggatggtcacaggccttcttttcttcacttaacagcata 565
Query: 364 gaatttgctaacaggatggaaatagtgaggttgattgtagcaaattcttggaactccctg 423
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 566 gaatttgctaacaggatggaaatggtgaggttgattgtaggaaattcttggaactccctg 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 825
Length adjustment: 9
Effective length of query: 414
Effective length of database: 816
Effective search space: 337824
Effective search space used: 337824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_h05.g1 MSMg01no139_h05.g1 CHROMAT_FILE:
MSMg01no139_h05.g1 PHD_FILE: MSMg01no139_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:51 2005
(342 letters)
>mm_chr9_28573434_28574175
Length = 742
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Minus
Query: 1 acccatggagatttaaataattgctgctgatgacatatttacagtgtcgtctcctgattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acccatggagatttaaataattgctgctgatgacatatttacagtgtcgtctcctgattt 482
Query: 61 gttctgtgtatttttttcttcttgctaccctgcatggtgcttttattttgttatacttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttctgtgtatttttttcttcttgctaccctgcatggtgcttttattttgttatacttat 422
Query: 121 atgtttgaatcctttttgattttttttccacgtaagttctataaatttaattttattcac 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 atgtttgaatcctttttgattttttttccacataagttctataaatttaattttattcac 362
Query: 181 tttggggcttagataaggtatcttatagcataacagtctaatttctgttgattataattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttggggcttagataaggtatcttatagcataacagtctaatttctgttgattataattt 302
Query: 241 atctttatagaacctctacacattaactcccttccccttttatgttgttgtcaaaaatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctttatagaacctctacacattaactcccttccccttttatgttgttgtcaaaaatct 242
Query: 301 acatttcttcatatttagcagtatttatatttatggttttg 341
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 acatttcttcatatttagcagtagttatatttatggttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
